RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 WDR33Q9C0J8 1336 aaKnown RBP4.5□□□□□ -1.69
BRCA1-212ENST00000473961 CLSPNQ9HAW4 1339 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 A0A1W2PQM1 296 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 A0A1W2PRG0 241 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 TACC1O75410 805 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 ZNF202O95125 648 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 IPO7O95373 1038 aaKnown RBP4.5□□□□□ -1.69
BRCA1-212ENST00000473961 NFATC1O95644 943 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 ADAP00813 363 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 CD63P08962 238 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 HOXB5P09067 269 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 PCNAP12004 261 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 AKR1B1P15121 316 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 TFEBP19484 476 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 SAT1P21673 171 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 YWHAQP27348 245 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 TM4SF1P30408 202 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 MCM7P33993 719 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 PTGER1P34995 402 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 SLC12A2P55011 1212 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 RHAGQ02094 409 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 CYP4A11Q02928 519 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 TMEM115Q12893 351 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-212ENST00000473961 STK4Q13043 487 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 SEMA3AQ14563 771 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 MED22Q15528 200 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 PLK5Q496M5 336 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 ARL13AQ5H913 290 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-212ENST00000473961 AKNAD1Q5T1N1 836 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 HMBOX1Q6NT76 420 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 ZNF474Q6S9Z5 364 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-212ENST00000473961 CYB5R4Q7L1T6 521 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 RTL10Q7L3V2 364 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 RFX6Q8HWS3 928 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 RHPN2Q8IUC4 686 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 ARHGAP12Q8IWW6 846 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 TMEM116Q8NCL8 245 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 FAM110DQ8TAY7 271 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-212ENST00000473961 STRA6Q9BX79 667 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 ZNF341Q9BYN7 854 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 FBRSL1Q9HCM7 1045 aaKnown RBP4.5□□□□□ -1.69
BRCA1-212ENST00000473961 Q9N2J8 555 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 PLSCR4Q9NRQ2 329 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 SNTG1Q9NSN8 517 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 RRP7BPQ9NSQ0 103 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 C20orf141Q9NUB4 165 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 GRHL1Q9NZI5 618 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 SH3BP4Q9P0V3 963 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 MORF4L1Q9UBU8 362 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 SLCO3A1Q9UIG8 710 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 HAO1Q9UJM8 370 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 SESN1Q9Y6P5 492 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 RUSC2Q8N2Y8 1516 aa4.5□□□□□ -1.69
BRCA1-212ENST00000473961 FAM237BA0A1B0GVD1 139 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 DPPA5A6NC42 116 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 USP17L23D6RBM5 183 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 P4HA2O15460 535 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 DKC1O60832 514 aaKnown RBP eCLIP4.49□□□□□ -1.69
BRCA1-212ENST00000473961 SLC2A4P14672 509 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 ATF7P17544 494 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-212ENST00000473961 PTPN2P17706 415 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 WT1P19544 449 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-212ENST00000473961 GPD1P21695 349 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 LMO1P25800 156 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 MAPK4P31152 587 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 TTKP33981 857 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 ADRA1BP35368 520 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 NIPAL4Q0D2K0 466 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 ABHD18Q0P651 414 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 CSTF3Q12996 717 aaKnown RBP4.49□□□□□ -1.69
BRCA1-212ENST00000473961 MTA1Q13330 715 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 PRPF4BQ13523 1007 aaKnown RBP4.49□□□□□ -1.69
BRCA1-212ENST00000473961 ZNF667Q5HYK9 610 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 NCAPH2Q6IBW4 605 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 NAPEPLDQ6IQ20 393 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 PDXDC1Q6P996 788 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 KLHL35Q6PF15 583 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 CPLX2Q6PUV4 134 aaKnown RBP4.49□□□□□ -1.69
BRCA1-212ENST00000473961 RBM44Q6ZP01 1051 aaKnown RBP4.49□□□□□ -1.69
BRCA1-212ENST00000473961 FAR1Q8WVX9 515 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 SGCDQ92629 289 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 GTF3C6Q969F1 213 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 OTULINQ96BN8 352 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 PGAM5Q96HS1 289 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 CMTM3Q96MX0 182 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 UROC1Q96N76 676 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 FCRL5Q96RD9 977 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 ZNF347Q96SE7 839 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 TIMP4Q99727 224 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 PRRX2Q99811 253 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 BAG1Q99933 345 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-212ENST00000473961 TEX12Q9BXU0 123 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 TOR3AQ9H497 397 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 MMRN2Q9H8L6 949 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 ATP8A2Q9NTI2 1148 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 FOXJ2Q9P0K8 574 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 DLGAP2Q9P1A6 1054 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 A4GNTQ9UNA3 340 aa4.49□□□□□ -1.69
BRCA1-212ENST00000473961 WNT6Q9Y6F9 365 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms