RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ARF5P84085 180 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 LRRC63Q05C16 580 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 TCEA2Q15560 299 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 ARL13BQ3SXY8 428 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 LRRC73Q5JTD7 316 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 RABGAP1LQ5R372 815 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 NEK5Q6P3R8 708 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 FOXR1Q6PIV2 292 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 KYAT3Q6YP21 454 aaKnown RBP9.82□□□□□ -0.84
MCF2L-223ENST00000473345 TFAP2DQ7Z6R9 452 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 DSG4Q86SJ6 1040 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 CLEC14AQ86T13 490 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 CCDC117Q8IWD4 279 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-223ENST00000473345 ATP11CQ8NB49 1132 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 NETO2Q8NC67 525 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 C1orf131Q8NDD1 294 aaKnown RBP9.82□□□□□ -0.84
MCF2L-223ENST00000473345 OR6K2Q8NGY2 324 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 NPY6RQ99463 290 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 LRRC61Q9BV99 259 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 BOCQ9BWV1 1114 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 SLC17A9Q9BYT1 436 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 GTPBP4Q9BZE4 634 aaKnown RBP9.82□□□□□ -0.84
MCF2L-223ENST00000473345 DPH1Q9BZG8 443 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 UBE2TQ9NPD8 197 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-223ENST00000473345 MBNL1Q9NR56 388 aaKnown RBP9.82□□□□□ -0.84
MCF2L-223ENST00000473345 THSD1Q9NS62 852 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 NDFIP2Q9NV92 336 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 ARHGEF38Q9NXL2 777 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 HS3ST3A1Q9Y663 406 aa9.82□□□□□ -0.84
MCF2L-223ENST00000473345 IGLV3-10A0A075B6K4 115 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 DRGXA6NNA5 263 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 A6NNZ2 444 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 M0QYT0 321 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 AGRPO00253 132 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 NTN3O00634 580 aaPredicted RBP9.81□□□□□ -0.84
MCF2L-223ENST00000473345 TERTO14746 1132 aaKnown RBP9.81□□□□□ -0.84
MCF2L-223ENST00000473345 SART1O43290 800 aaKnown RBP9.81□□□□□ -0.84
MCF2L-223ENST00000473345 AQP9O43315 295 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 TNFSF15O95150 251 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 SLC9A1P19634 815 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 GNA15P30679 374 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 IGFALSP35858 605 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 UCNP55089 124 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 CDH4P55283 916 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 STX17P56962 302 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 CDK17Q00537 523 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 PDE1CQ14123 709 aaPredicted RBP9.81□□□□□ -0.84
MCF2L-223ENST00000473345 CCDC40Q4G0X9 1142 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 C2CD6Q53TS8 623 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 TTC39BQ5VTQ0 682 aaPredicted RBP9.81□□□□□ -0.84
MCF2L-223ENST00000473345 BROXQ5VW32 411 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 KLHL10Q6JEL2 608 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 DPY19L2P1Q6NXN4 242 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 ZCCHC8Q6NZY4 707 aaKnown RBP9.81□□□□□ -0.84
MCF2L-223ENST00000473345 LSMEM2Q8N112 164 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 LMX1AQ8TE12 382 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 IFT43Q96FT9 208 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 PPP1R13BQ96KQ4 1090 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 CEP63Q96MT8 703 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 GSDMAQ96QA5 445 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 TSG101Q99816 390 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 CRACR2AQ9BSW2 395 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 C1QTNF2Q9BXJ5 285 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 MUC3BQ9H195 1237 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 IL36AQ9UHA7 158 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 NEU3Q9UQ49 428 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 FCF1Q9Y324 198 aaKnown RBP9.81□□□□□ -0.84
MCF2L-223ENST00000473345 PCDHGA8Q9Y5G5 932 aa9.81□□□□□ -0.84
MCF2L-223ENST00000473345 A0A1W2PQM1 296 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 P4HA2O15460 535 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 CLDN11O75508 207 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 DAB1O75553 588 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 RHOCP08134 193 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 JUNDP17535 347 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 ACVRL1P37023 503 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 CXCR3P49682 368 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 CCNHP51946 323 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-223ENST00000473345 HNRNPKP61978 463 aaKnown RBP eCLIP9.8□□□□□ -0.84
MCF2L-223ENST00000473345 KCNC4Q03721 635 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 NFATC3Q12968 1075 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 MEA1Q16626 185 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 ZSCAN23Q3MJ62 389 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 LEKR1Q6ZMV7 388 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 PRICKLE2Q7Z3G6 844 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 TMPRSS9Q7Z410 1059 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 BNIPLQ7Z465 357 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 PARGQ86W56 976 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 DCAF4L2Q8NA75 395 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 KYQ8NBH2 561 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 NELFBQ8WX92 580 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 HTR3CQ8WXA8 447 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 EXTL1Q92935 676 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 NT5C3BQ969T7 300 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 CENPTQ96BT3 561 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 TBCBQ99426 244 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 CCDC3Q9BQI4 270 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 FOXP3Q9BZS1 431 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 TKTL2Q9H0I9 626 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 ABCG4Q9H172 646 aa9.8□□□□□ -0.84
MCF2L-223ENST00000473345 SIX2Q9NPC8 291 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms