RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.97■■□□□ 1.273e-7■■■□□ 15.4
PTP4A1-203ENST00000473334 TM6SF2Q9BZW4 377 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 XPO4Q9C0E2 1151 aaKnown RBP22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 GPATCH2LQ9NWQ4 482 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 ANGPTL2Q9UKU9 493 aa22.97■■□□□ 1.27
PTP4A1-203ENST00000473334 RNF103O00237 685 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 CD38P28907 300 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 KCNT1Q5JUK3 1230 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 ERMARDQ5T6L9 678 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 NAPEPLDQ6IQ20 393 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 ERN2Q76MJ5 926 aaKnown RBP22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 CAMK1GQ96NX5 476 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 PEBP4Q96S96 227 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 SNRNP25Q9BV90 132 aaKnown RBP22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 HDAC8Q9BY41 377 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 DHX35Q9H5Z1 703 aaKnown RBP22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 DONSONQ9NYP3 566 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 ARHGAP20Q9P2F6 1191 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 PCSK1NQ9UHG2 260 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 DMTF1Q9Y222 760 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 PCDHGB2Q9Y5G2 931 aa22.96■■□□□ 1.27
PTP4A1-203ENST00000473334 SPAARA0A1B0GVQ0 90 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 A0A1W2PR77 199 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 PRPSAP2O60256 369 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 WNT1P04628 370 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 MAT2AP31153 395 aaKnown RBP22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 SIM1P81133 766 aaPredicted RBP22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 SHC2P98077 582 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 ZNF423Q2M1K9 1284 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 PARP15Q460N3 678 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 SLC45A4Q5BKX6 768 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 LEKR1Q6ZMV7 388 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 UMODL1-AS1Q8N2C9 162 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 HMCESQ96FZ2 354 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 NCAPGQ9BPX3 1015 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 ZDHHC6Q9H6R6 413 aa22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 HECAQ9UBI9 543 aaPredicted RBP22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.95■■□□□ 1.26
PTP4A1-203ENST00000473334 RASA4BC9J798 803 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 WNT9AO14904 365 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 RASA4O43374 803 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 BUB1O43683 1085 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 RNGTTO60942 597 aaKnown RBP22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 LRCH4O75427 683 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 GSRP00390 522 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 ITGB7P26010 798 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 MIPP30301 263 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 CCT8P50990 548 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 NEK3P51956 506 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 SNRPD1P62314 119 aaKnown RBP22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 FAM193AP78312 1265 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 CA9Q16790 459 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 SETMARQ53H47 684 aaPredicted RBP22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 NEK5Q6P3R8 708 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 PSTKQ8IV42 348 aaKnown RBP22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 OR2AP1Q8NGE2 309 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 CASKIN2Q8WXE0 1202 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 TSPY26PQ9H489 355 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 PCDHB9Q9Y5E1 797 aa22.94■■□□□ 1.26
PTP4A1-203ENST00000473334 KNL1Q8NG31 2342 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 DOCK9Q9BZ29 2069 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 H0Y8X5 98 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 EEF2KO00418 725 aaKnown RBP22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 KCNK3O14649 394 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 FLRT2O43155 660 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 CBFA2T2O43439 604 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 DFNA5O60443 496 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 TMCC1O94876 653 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 CASP14P31944 242 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 FOXC1Q12948 553 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 SERINC3Q13530 473 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 SUZ12Q15022 739 aaKnown RBP22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 ACAP1Q15027 740 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 DBX2Q6ZNG2 339 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 CYP4V2Q6ZWL3 525 aaPredicted RBP22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 RYBPQ8N488 228 aaPredicted RBP22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 SETD7Q8WTS6 366 aaKnown RBP22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 LRIG1Q96JA1 1093 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 KCTD15Q96SI1 283 aaPredicted RBP22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 KLC2Q9H0B6 622 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 PCOLCE2Q9UKZ9 415 aa22.93■■□□□ 1.26
PTP4A1-203ENST00000473334 A0A087X0T9 212 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 FAM228BP0C875 321 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 PCK1P35558 622 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 NDST2P52849 883 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 TRIP6Q15654 476 aaKnown RBP22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 INO80DQ53TQ3 878 aaPredicted RBP22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 HORMAD1Q86X24 394 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 OR6K2Q8NGY2 324 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 CNTNAP3BQ96NU0 1288 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 CNTNAP3Q9BZ76 1288 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 THAP2Q9H0W7 228 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 LRRC19Q9H756 370 aa22.92■■□□□ 1.26
PTP4A1-203ENST00000473334 A0A1W2PQU0 124 aa22.91■■□□□ 1.26
PTP4A1-203ENST00000473334 PRAMEF26H0Y7S4 382 aa22.91■■□□□ 1.26
PTP4A1-203ENST00000473334 DAPK3O43293 454 aa22.91■■□□□ 1.26
PTP4A1-203ENST00000473334 CBFA2T3O75081 653 aa22.91■■□□□ 1.26
PTP4A1-203ENST00000473334 ADRB3P13945 408 aa22.91■■□□□ 1.26
PTP4A1-203ENST00000473334 ZNF135P52742 658 aaPredicted RBP22.91■■□□□ 1.26
PTP4A1-203ENST00000473334 NFKBIBQ15653 356 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms