RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ZMIZ2Q8NF64 920 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 SMOQ99835 787 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 PKP2Q99959 881 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 MCMBPQ9BTE3 642 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 MID2Q9UJV3 735 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 CDYLQ9Y232 598 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 IPPQ9Y573 584 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 MYBPHLA2RUH7 354 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 PTGESO14684 152 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 MAP7Q14244 749 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 ANO4Q32M45 955 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 C6orf52Q5T4I8 152 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 ZNF280DQ6N043 979 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 ZFP1Q6P2D0 407 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 LIMS2Q7Z4I7 341 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 PGAM4Q8N0Y7 254 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 DTNBP1Q96EV8 351 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 OMDQ99983 421 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 ZNF385DQ9H6B1 395 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 VPS28Q9UK41 221 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 GNEQ9Y223 722 aaKnown RBP21.42■■□□□ 1.02
COL18A1-207ENST00000473212 RUVBL2Q9Y230 463 aaKnown RBP21.42■■□□□ 1.02
COL18A1-207ENST00000473212 TCN1P20061 433 aaPredicted RBP21.42■■□□□ 1.02
COL18A1-207ENST00000473212 MYBPC1Q00872 1141 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 PPIDQ08752 370 aaKnown RBP21.42■■□□□ 1.02
COL18A1-207ENST00000473212 PRKAA1Q13131 559 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 ART3Q13508 389 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 FRG1Q14331 258 aaKnown RBP21.42■■□□□ 1.02
COL18A1-207ENST00000473212 USP10Q14694 798 aaKnown RBP21.42■■□□□ 1.02
COL18A1-207ENST00000473212 NADK2Q4G0N4 442 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 IYDQ6PHW0 289 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 TICAM1Q8IUC6 712 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 DENND6AQ8IWF6 608 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 SHCBP1Q8NEM2 672 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 FTHL17Q9BXU8 183 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 GRIP2Q9C0E4 1043 aa21.42■■□□□ 1.02
COL18A1-207ENST00000473212 CCDC160A6NGH7 325 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 MT-CYBP00156 380 aaPredicted RBP21.41■■□□□ 1.02
COL18A1-207ENST00000473212 APOA4P06727 396 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 ME2P23368 584 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 RGS2P41220 211 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 CTBP1Q13363 440 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 KDELC2Q7Z4H8 507 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 SLC41A1Q8IVJ1 513 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 MFSD6LQ8IWD5 586 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 LSMEM2Q8N112 164 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 CNTD1Q8N815 330 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 HIC2Q96JB3 615 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 TSNARE1Q96NA8 513 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 GPR22Q99680 433 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 NPAS2Q99743 824 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 GBA3Q9H227 469 aa21.41■■□□□ 1.02
COL18A1-207ENST00000473212 DAOAP59103 153 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 CCNA1P78396 465 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 MPP1Q00013 466 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 CDKL1Q00532 357 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 SV2CQ496J9 727 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 SETD3Q86TU7 594 aaPredicted RBP21.4■■□□□ 1.02
COL18A1-207ENST00000473212 FAM156AQ8NDB6 213 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 TMA16Q96EY4 203 aaKnown RBP21.4■■□□□ 1.02
COL18A1-207ENST00000473212 KLHL32Q96NJ5 620 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 IL22Q9GZX6 179 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 PDHXO00330 501 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 CABYRO75952 493 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 NSUN2Q08J23 767 aaKnown RBP eCLIP21.4■■□□□ 1.02
COL18A1-207ENST00000473212 PDZD4Q76G19 769 aaPredicted RBP21.4■■□□□ 1.02
COL18A1-207ENST00000473212 ZC3HC1Q86WB0 502 aaKnown RBP21.4■■□□□ 1.02
COL18A1-207ENST00000473212 FSTL5Q8N475 847 aaPredicted RBP21.4■■□□□ 1.02
COL18A1-207ENST00000473212 CATSPER1Q8NEC5 780 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 ADCY4Q8NFM4 1077 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 RDH11Q8TC12 318 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 SGF29Q96ES7 293 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 MAML3Q96JK9 1138 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 ZBTB26Q9HCK0 441 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 AK5Q9Y6K8 562 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 DOCK3Q8IZD9 2030 aa21.4■■□□□ 1.02
COL18A1-207ENST00000473212 LRIG2O94898 1065 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 NPY2RP49146 381 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 SH3BGRP55822 239 aaPredicted RBP21.39■■□□□ 1.02
COL18A1-207ENST00000473212 KLHDC10Q6PID8 442 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 PAOXQ6QHF9 649 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 EGFL6Q8IUX8 553 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 NPLOC4Q8TAT6 608 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 ZSCAN18Q8TBC5 510 aaPredicted RBP21.39■■□□□ 1.02
COL18A1-207ENST00000473212 PCED1BQ96HM7 432 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 DNAJC1Q96KC8 554 aaKnown RBP21.39■■□□□ 1.02
COL18A1-207ENST00000473212 PRPF18Q99633 342 aaKnown RBP21.39■■□□□ 1.02
COL18A1-207ENST00000473212 SUDS3Q9H7L9 328 aaPredicted RBP21.39■■□□□ 1.02
COL18A1-207ENST00000473212 EFCAB1Q9HAE3 211 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 BCAP29Q9UHQ4 241 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 ANKRD6Q9Y2G4 727 aa21.39■■□□□ 1.02
COL18A1-207ENST00000473212 COPG1Q9Y678 874 aaKnown RBP21.39■■□□□ 1.02
COL18A1-207ENST00000473212 MAGEB16A2A368 324 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 DDHD2O94830 711 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 SLC35E2BP0CK96 405 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 YBX3P16989 372 aaKnown RBP eCLIP21.39■■□□□ 1.014e-6■□□□□ 11.2
COL18A1-207ENST00000473212 WARSP23381 471 aaKnown RBP21.39■■□□□ 1.01
COL18A1-207ENST00000473212 CSRP3P50461 194 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 POU6F1Q14863 301 aa21.39■■□□□ 1.01
COL18A1-207ENST00000473212 LRRC23Q53EV4 343 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms