RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 PCDH19Q8TAB3 1148 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 FRS2Q8WU20 508 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 PDCD6IPQ8WUM4 868 aaKnown RBP10.48□□□□□ -0.73
CDHR3-209ENST00000472116 C5orf34Q96MH7 638 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 TWNKQ96RR1 684 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 CYP3A43Q9HB55 503 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 AGPAT3Q9NRZ7 376 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 MAP10Q9P2G4 905 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 GPR34Q9UPC5 381 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 LIMCH1Q9UPQ0 1083 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 ZFR2Q9UPR6 939 aaKnown RBP10.48□□□□□ -0.73
CDHR3-209ENST00000472116 NAALADL1Q9UQQ1 740 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 CELSR1Q9NYQ6 3014 aa10.48□□□□□ -0.73
CDHR3-209ENST00000472116 ARHGAP10A1A4S6 786 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 FRMD3A2A2Y4 597 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 ZW10O43264 779 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 DUX1O43812 170 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 PDGFRAP16234 1089 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 PDCP20941 246 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 CASP4P49662 377 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 NUMBP49757 651 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 ARHGEF7Q14155 803 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 ZXDCQ2QGD7 858 aaPredicted RBP10.47□□□□□ -0.73
CDHR3-209ENST00000472116 DCAF6Q58WW2 860 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 MS4A13Q5J8X5 152 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 CCDC150Q8NCX0 1101 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 ASPSCR1Q9BZE9 553 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 TCEAL2Q9H3H9 227 aaPredicted RBP10.47□□□□□ -0.73
CDHR3-209ENST00000472116 PCDHB3Q9Y5E6 796 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 PCDHGA3Q9Y5H0 932 aa10.47□□□□□ -0.73
CDHR3-209ENST00000472116 MTORP42345 2549 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 CSMD1Q96PZ7 3565 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 A0A1B0GTL3 188 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 HGSO14964 777 aaPredicted RBP10.46□□□□□ -0.73
CDHR3-209ENST00000472116 SPTLC2O15270 562 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 SPINT1O43278 529 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 ATP9BO43861 1147 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 VNN1O95497 513 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 MOCS2O96007 188 aaPredicted RBP10.46□□□□□ -0.73
CDHR3-209ENST00000472116 LDLRP01130 860 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 IGLV3-27P01718 113 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 C4BPAP04003 597 aaKnown RBP10.46□□□□□ -0.73
CDHR3-209ENST00000472116 CCL4P13236 92 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 GLB1P16278 677 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 OAS2P29728 719 aaKnown RBP10.46□□□□□ -0.73
CDHR3-209ENST00000472116 CHRNA3P32297 505 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 NEK3P51956 506 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 ADIGQ0VDE8 80 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 C16orf72Q14CZ0 275 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 ZNF394Q53GI3 561 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 EFHC2Q5JST6 749 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 NADSYN1Q6IA69 706 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 SPOPLQ6IQ16 392 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 KDELC2Q7Z4H8 507 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 PIM3Q86V86 326 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 SLITRK4Q8IW52 837 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 TP53INP2Q8IXH6 220 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 LGI2Q8N0V4 545 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 DENND6BQ8NEG7 585 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 TMIEQ8NEW7 156 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 KCTD13Q8WZ19 329 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 NDRG1Q92597 394 aaKnown RBP10.46□□□□□ -0.73
CDHR3-209ENST00000472116 POM121Q96HA1 1249 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 DDA1Q9BW61 102 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 CLPBQ9H078 707 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 NUCKS1Q9H1E3 243 aaKnown RBP10.46□□□□□ -0.73
CDHR3-209ENST00000472116 SLC5A6Q9Y289 635 aa10.46□□□□□ -0.73
CDHR3-209ENST00000472116 LRP4O75096 1905 aa10.46□□□□□ -0.74
CDHR3-209ENST00000472116 ABCA2Q9BZC7 2435 aa10.46□□□□□ -0.74
CDHR3-209ENST00000472116 APCP25054 2843 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 LRRIQ3A6PVS8 624 aaPredicted RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 H3BQV1 296 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 NEMP1O14524 444 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 RAD51BO15315 384 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 RFPL1O75677 317 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 CPNE6O95741 557 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 ASS1P00966 412 aaKnown RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 APOEP02649 317 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 PNLIPP16233 465 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 VARSP26640 1264 aaKnown RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 MAP4P27816 1152 aaKnown RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 MAN1A1P33908 653 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 STAT6P42226 847 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 LEPRP48357 1165 aaKnown RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 YPEL5P62699 121 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 MSANTD2Q6P1R3 559 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 CCDC73Q6ZRK6 1079 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 SPRED1Q7Z699 444 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 CHSY1Q86X52 802 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 NRSN1Q8IZ57 195 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 NLGN4XQ8N0W4 816 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 TTC39CQ8N584 583 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 ANKRD52Q8NB46 1076 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 NLGN4YQ8NFZ3 816 aaPredicted RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 STARD8Q92502 1023 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 EPSTI1Q96J88 318 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 SERPINB11Q96P15 392 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 LENG8Q96PV6 779 aaPredicted RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 HDAC8Q9BY41 377 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms