RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 UPB1Q9UBR1 384 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 ERRFI1Q9UJM3 462 aaPredicted RBP4.96□□□□□ -1.62
CD46-213ENST00000471987 LRCH1Q9Y2L9 728 aa4.96□□□□□ -1.62
CD46-213ENST00000471987 PLGP00747 810 aaPredicted RBP4.95□□□□□ -1.62
CD46-213ENST00000471987 SERPINF1P36955 418 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 PNLIPRP1P54315 467 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 DLX5P56178 289 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 BNC1Q01954 994 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 GRSF1Q12849 480 aaKnown RBP eCLIP4.95□□□□□ -1.62
CD46-213ENST00000471987 XRRA1Q6P2D8 792 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 TRIM74Q86UV6 250 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 TRIM73Q86UV7 250 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 BRSK2Q8IWQ3 736 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 RBFAQ8N0V3 343 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 RFLNBQ8N5W9 214 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 NEXN-AS1Q8NBZ9 246 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 HES6Q96HZ4 224 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 INPP4AQ96PE3 977 aaPredicted RBP4.95□□□□□ -1.62
CD46-213ENST00000471987 KRTAP4-4Q9BYR3 166 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 LHPPQ9H008 270 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 DHDHQ9UQ10 334 aa4.95□□□□□ -1.62
CD46-213ENST00000471987 KDM4EB2RXH2 506 aaPredicted RBP4.94□□□□□ -1.62
CD46-213ENST00000471987 TFRCP02786 760 aaKnown RBP4.94□□□□□ -1.62
CD46-213ENST00000471987 CYP21A2P08686 494 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 YWHAQP27348 245 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 PDIA3P30101 505 aaKnown RBP4.94□□□□□ -1.62
CD46-213ENST00000471987 TNFAIP2Q03169 654 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 MYBPC2Q14324 1141 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 ZRSR1Q15695 479 aaKnown RBP4.94□□□□□ -1.62
CD46-213ENST00000471987 OTUD3Q5T2D3 398 aaPredicted RBP4.94□□□□□ -1.62
CD46-213ENST00000471987 TBC1D9BQ66K14 1250 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 CCSAPQ6IQ19 270 aaPredicted RBP4.94□□□□□ -1.62
CD46-213ENST00000471987 FSIP1Q8NA03 581 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 LILRB1Q8NHL6 650 aaPredicted RBP4.94□□□□□ -1.62
CD46-213ENST00000471987 TXNDC15Q96J42 360 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 TRAPPC9Q96Q05 1148 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 FBXO40Q9UH90 709 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 SLC45A1Q9Y2W3 748 aa4.94□□□□□ -1.62
CD46-213ENST00000471987 A0A096LPK6 155 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 A0A0B4J293 547 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 BUB3O43684 328 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 STRNO43815 780 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 CKMT1AP12532 417 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 AVPR2P30518 371 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 GPR12P47775 334 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 MXI1P50539 228 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 GALNT1Q10472 559 aaPredicted RBP4.93□□□□□ -1.62
CD46-213ENST00000471987 CTTNQ14247 550 aaKnown RBP4.93□□□□□ -1.62
CD46-213ENST00000471987 LRRC24Q50LG9 513 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 SYNE3Q6ZMZ3 975 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 TMPRSS12Q86WS5 348 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 ATG16L2Q8NAA4 619 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 ADGRG7Q96K78 797 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 THAP1Q9NVV9 213 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 GRHL1Q9NZI5 618 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 KCND3Q9UK17 655 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 DOCK7Q96N67 2140 aa4.93□□□□□ -1.62
CD46-213ENST00000471987 A0A1B0GVM2 712 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 FAM90A20PA6NIJ5 464 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 IFIT2P09913 472 aaKnown RBP4.92□□□□□ -1.62
CD46-213ENST00000471987 ACP5P13686 325 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 TBX4P57082 545 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 PDCLQ13371 301 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 PUM3Q15397 648 aaKnown RBP4.92□□□□□ -1.62
CD46-213ENST00000471987 RUNDC3AQ59EK9 446 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 LIN54Q6MZP7 749 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 RRAGAQ7L523 313 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 GALNT15Q8N3T1 639 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 WDR12Q9GZL7 423 aaKnown RBP4.92□□□□□ -1.62
CD46-213ENST00000471987 NPFFR1Q9GZQ6 430 aa4.92□□□□□ -1.62
CD46-213ENST00000471987 IGLV5-37A0A075B6J1 123 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 TARSL2A2RTX5 802 aaKnown RBP4.91□□□□□ -1.62
CD46-213ENST00000471987 ACKR2O00590 384 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 SEPT4O43236 478 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 F7P08709 466 aaPredicted RBP4.91□□□□□ -1.62
CD46-213ENST00000471987 ARSAP15289 507 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 PEX5P50542 639 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 ADORA2A-AS1P86434 159 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 ICA1Q05084 483 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 SF3B4Q15427 424 aaKnown RBP eCLIP4.91□□□□□ -1.627e-12■■■■■ 30.3
CD46-213ENST00000471987 SULT6B1Q6IMI4 303 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 TYW3Q6IPR3 259 aaKnown RBP4.91□□□□□ -1.62
CD46-213ENST00000471987 RETSATQ6NUM9 610 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 MUC20Q8N307 709 aaPredicted RBP4.91□□□□□ -1.62
CD46-213ENST00000471987 OTUD7AQ8TE49 926 aaPredicted RBP4.91□□□□□ -1.62
CD46-213ENST00000471987 TBC1D22AQ8WUA7 517 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 RMDN3Q96TC7 470 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 TCF7L2Q9NQB0 619 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 DACT1Q9NYF0 836 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 LRFN1Q9P244 771 aa4.91□□□□□ -1.62
CD46-213ENST00000471987 A0A0U1RQJ8 604 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 OR6C68A6NDL8 312 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 CBX6O95503 412 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 METTL18O95568 372 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 IGLV2-11P01706 119 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 SETSIPP0DME0 302 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 PNPLA4P41247 253 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 ST3GAL1Q11201 340 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 SNTA1Q13424 505 aa4.9□□□□□ -1.63
CD46-213ENST00000471987 THOC5Q13769 683 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms