RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 PNLIPRP2P54317 469 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 F2RL1P55085 397 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 SCN1BQ07699 218 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 KIAA2012Q0VF49 1180 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 GSTA3Q16772 222 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 GLDNQ6ZMI3 551 aaPredicted RBP6.35□□□□□ -1.39
NF1-208ENST00000471572 CFAP77Q6ZQR2 320 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 SYT12Q8IV01 421 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 IZUMO1Q8IYV9 350 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 VPS52Q8N1B4 723 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 MB21D1Q8N884 522 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 TC2NQ8N9U0 490 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 CTCFLQ8NI51 663 aaPredicted RBP6.35□□□□□ -1.39
NF1-208ENST00000471572 NEK9Q8TD19 979 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 ATG4AQ8WYN0 398 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 TRIM44Q96DX7 344 aaPredicted RBP6.35□□□□□ -1.39
NF1-208ENST00000471572 CFAP57Q96MR6 1250 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 CARD11Q9BXL7 1154 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 MRPL1Q9BYD6 325 aaKnown RBP6.35□□□□□ -1.39
NF1-208ENST00000471572 NAP1L2Q9ULW6 460 aaPredicted RBP6.35□□□□□ -1.39
NF1-208ENST00000471572 MTMR6Q9Y217 621 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 ARHGAP35Q9NRY4 1499 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 DIP2BQ9P265 1576 aa6.35□□□□□ -1.39
NF1-208ENST00000471572 SYNRGQ9UMZ2 1314 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 AATKQ6ZMQ8 1374 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 A0A1W2PR77 199 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 LRRD1A4D1F6 860 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 EIF3CLB5ME19 914 aaKnown RBP6.34□□□□□ -1.39
NF1-208ENST00000471572 PGRMC2O15173 223 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 GSC2O15499 205 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 SMPD2O60906 423 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 USP12O75317 370 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 ONECUT2O95948 504 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 TGFB1P01137 390 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 PTPN9P43378 593 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 MTHFSP49914 203 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 CCR3P51677 355 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 TKTL1P51854 596 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 TAP1Q03518 808 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 IKQ13123 557 aaPredicted RBP6.34□□□□□ -1.39
NF1-208ENST00000471572 TUBB3Q13509 450 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 ZNF273Q14593 569 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 FAM187BQ17R55 369 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 IGSF11Q5DX21 431 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 RBM20Q5T481 1227 aaKnown RBP6.34□□□□□ -1.39
NF1-208ENST00000471572 ACSM6Q6P461 480 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 RNF144BQ7Z419 303 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 ZER1Q7Z7L7 766 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 CNTN4Q8IWV2 1026 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 OSCP1Q8WVF1 389 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 C16orf45Q96MC5 204 aaPredicted RBP6.34□□□□□ -1.39
NF1-208ENST00000471572 KIFC3Q9BVG8 833 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 NPLQ9BXD5 320 aaPredicted RBP6.34□□□□□ -1.39
NF1-208ENST00000471572 REXO4Q9GZR2 422 aaKnown RBP6.34□□□□□ -1.39
NF1-208ENST00000471572 PLK3Q9H4B4 646 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 SAP30LQ9HAJ7 183 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 USP29Q9HBJ7 922 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 MAGEE1Q9HCI5 957 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 ACTR3BQ9P1U1 418 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 CPSF3Q9UKF6 684 aaKnown RBP6.34□□□□□ -1.39
NF1-208ENST00000471572 TRIM17Q9Y577 477 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 LIPGQ9Y5X9 500 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 AOX1Q06278 1338 aa6.34□□□□□ -1.39
NF1-208ENST00000471572 NUP153P49790 1475 aaKnown RBP6.34□□□□□ -1.4
NF1-208ENST00000471572 VEGFDO43915 354 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 IPO7O95373 1038 aaKnown RBP6.33□□□□□ -1.4
NF1-208ENST00000471572 CYP4B1P13584 511 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 ZFXP17010 805 aaPredicted RBP6.33□□□□□ -1.4
NF1-208ENST00000471572 RABIFP47224 123 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 FAM189BP81408 668 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 B4GALNT1Q00973 533 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 TRIM29Q14134 588 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 GXYLT1Q4G148 440 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 FAM171A1Q5VUB5 890 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 Q6ZUG5 572 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 DOK3Q7L591 496 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 ZNF605Q86T29 641 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 FAM109AQ8N4B1 249 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 TTLL6Q8N841 843 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 ABHD4Q8TB40 342 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 ST8SIA2Q92186 375 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 ZBTB8AQ96BR9 441 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 PTERQ96BW5 349 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 OR2A14Q96R47 310 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 MGME1Q9BQP7 344 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 SLC25A23Q9BV35 468 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 ELOVL1Q9BW60 279 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 TRIM7Q9C029 511 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 HRH4Q9H3N8 390 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 CNIH4Q9P003 139 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 CNOT8Q9UFF9 292 aaKnown RBP6.33□□□□□ -1.4
NF1-208ENST00000471572 CTNND2Q9UQB3 1225 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 RAPGEF6Q8TEU7 1601 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 ZNF213O14771 459 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 PRICKLE3O43900 615 aaPredicted RBP6.33□□□□□ -1.4
NF1-208ENST00000471572 ERCC2P18074 760 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 MCM5P33992 734 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 NDUFV1P49821 464 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 NT5C2P49902 561 aa6.33□□□□□ -1.4
NF1-208ENST00000471572 HTD2P86397 168 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms