RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 DPH1Q9BZG8 443 aa9.35□□□□□ -0.91
CPSF4-211ENST00000471455 MUC3BQ9H195 1237 aa9.35□□□□□ -0.91
CPSF4-211ENST00000471455 CNTN6Q9UQ52 1028 aa9.35□□□□□ -0.91
CPSF4-211ENST00000471455 HS3ST2Q9Y278 367 aa9.35□□□□□ -0.91
CPSF4-211ENST00000471455 SYNJ2BP-COX16A0A087WUM0 186 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 A6NNZ2 444 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 J3QKU1 62 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 SLC31A1O15431 190 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 FFAR2O15552 330 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 BNIP3LO60238 219 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 OPA1O60313 960 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 PIAS2O75928 621 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 LETM1O95202 739 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-211ENST00000471455 FGFR1OPO95684 399 aaKnown RBP9.34□□□□□ -0.91
CPSF4-211ENST00000471455 AFPP02771 609 aaKnown RBP9.34□□□□□ -0.91
CPSF4-211ENST00000471455 RHOCP08134 193 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 LSSP48449 732 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 CDH4P55283 916 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 HNRNPKP61978 463 aaKnown RBP eCLIP9.34□□□□□ -0.913e-6■■■■□ 21
CPSF4-211ENST00000471455 AUHQ13825 339 aaKnown RBP9.34□□□□□ -0.91
CPSF4-211ENST00000471455 POM121L1PQ3SYA9 428 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 PIP5KL1Q5T9C9 394 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 CDCP2Q5VXM1 449 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 FBXL22Q6P050 247 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 DENND1BQ6P3S1 775 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 CIR1Q86X95 450 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-211ENST00000471455 FMR1NBQ8N0W7 255 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-211ENST00000471455 SLC25A45Q8N413 288 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 FAM181AQ8N9Y4 354 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 ATP11CQ8NB49 1132 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 TMIEQ8NEW7 156 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 MAPK15Q8TD08 544 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 TIGD1Q96MW7 591 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 SLC2A13Q96QE2 648 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 INTS2Q9H0H0 1204 aaKnown RBP9.34□□□□□ -0.91
CPSF4-211ENST00000471455 SYNCQ9H7C4 482 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 POLR1BQ9H9Y6 1135 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 RRN3Q9NYV6 651 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 COX16Q9P0S2 106 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 SARDHQ9UL12 918 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 VANGL2Q9ULK5 521 aa9.34□□□□□ -0.91
CPSF4-211ENST00000471455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.34□□□□□ -0.91
CPSF4-211ENST00000471455 WIPF1O43516 503 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 USP12O75317 370 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 CSO75390 466 aaKnown RBP9.33□□□□□ -0.92
CPSF4-211ENST00000471455 PCDH8O95206 1070 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 MPOP05164 745 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 VSIG8P0DPA2 414 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 PRLRP16471 622 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 RBMS1P29558 406 aaKnown RBP9.33□□□□□ -0.92
CPSF4-211ENST00000471455 CHRNA3P32297 505 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 METAP1P53582 386 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 RPS21P63220 83 aaKnown RBP9.33□□□□□ -0.92
CPSF4-211ENST00000471455 CENPCQ03188 943 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 KIAA1161Q6NSJ0 714 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 ZCCHC8Q6NZY4 707 aaKnown RBP9.33□□□□□ -0.92
CPSF4-211ENST00000471455 LRRC31Q6UY01 552 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 KYAT3Q6YP21 454 aaKnown RBP9.33□□□□□ -0.92
CPSF4-211ENST00000471455 C11orf57Q6ZUT1 292 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-211ENST00000471455 ERN2Q76MJ5 926 aaKnown RBP9.33□□□□□ -0.92
CPSF4-211ENST00000471455 TMC6Q7Z403 805 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 PTAR1Q7Z6K3 402 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-211ENST00000471455 SETD3Q86TU7 594 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-211ENST00000471455 ARHGEF19Q8IW93 802 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 DEFB106AQ8N104 65 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 DCAF4L2Q8NA75 395 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 TPCN2Q8NHX9 752 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 WDR48Q8TAF3 677 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 LMO3Q8TAP4 145 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 SPATA20Q8TB22 786 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 ZNF606Q8WXB4 792 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 GLMNQ92990 594 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 HIC2Q96JB3 615 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 APOLD1Q96LR9 279 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 KREMEN1Q96MU8 473 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 MYOCQ99972 504 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 HDAC8Q9BY41 377 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 DNAJC28Q9NX36 388 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 STAP1Q9ULZ2 295 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 TBC1D30Q9Y2I9 924 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 PCDHB1Q9Y5F3 818 aa9.33□□□□□ -0.92
CPSF4-211ENST00000471455 POM121CA8CG34 1229 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 SCAMP1O15126 338 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 KLK10O43240 276 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 LZTS3O60299 673 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-211ENST00000471455 PAGE1O75459 146 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 DAB1O75553 588 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 CALCAP01258 141 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 SRCP12931 536 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 USP8P40818 1118 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 RABIFP47224 123 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 NUMBP49757 651 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 NEK3P51956 506 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 TAS2R38P59533 333 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 PTSQ03393 145 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 NME3Q13232 169 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 EIF4EBP2Q13542 120 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-211ENST00000471455 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.32□□□□□ -0.92
CPSF4-211ENST00000471455 ZNF284Q2VY69 593 aa9.32□□□□□ -0.92
CPSF4-211ENST00000471455 C5orf22Q49AR2 442 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms