RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 GRIN3AQ8TCU5 1115 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 RNF25Q96BH1 459 aaPredicted RBP20.09■□□□□ 0.81
HDAC7-220ENST00000471235 LOXL4Q96JB6 756 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 FBXL12Q9NXK8 326 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 IL36AQ9UHA7 158 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 GMEB2Q9UKD1 530 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 GON4LQ3T8J9 2241 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 PLK4O00444 970 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 NDUFS2O75306 463 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 CTNNA1P35221 906 aaKnown RBP20.08■□□□□ 0.81
HDAC7-220ENST00000471235 SNRPD1P62314 119 aaKnown RBP20.08■□□□□ 0.81
HDAC7-220ENST00000471235 GALNT2Q10471 571 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 IFI16Q16666 785 aaKnown RBP20.08■□□□□ 0.81
HDAC7-220ENST00000471235 POM121L1PQ3SYA9 428 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 ODF2Q5BJF6 829 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 FAM46CQ5VWP2 391 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 MFSD7Q6UXD7 560 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 ARMCX6Q7L4S7 300 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 PLPP6Q8IY26 295 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 DEFB119Q8N690 84 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 OR6K2Q8NGY2 324 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 KIAA1524Q8TCG1 905 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 GANCQ8TET4 914 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 GDAP1L1Q96MZ0 367 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 OMDQ99983 421 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 GPR174Q9BXC1 333 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 ZDHHC6Q9H6R6 413 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 FZD4Q9ULV1 537 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 CAPN6Q9Y6Q1 641 aa20.08■□□□□ 0.81
HDAC7-220ENST00000471235 NRDCO43847 1150 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 MAFKO60675 156 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 RNASEH2AO75792 299 aaKnown RBP20.07■□□□□ 0.8
HDAC7-220ENST00000471235 MAP3K6O95382 1288 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 IGSF6O95976 241 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 PRNPP04156 253 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 RETP07949 1114 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 ACSL1P33121 698 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 CDKN2BP42772 138 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 PTGER3P43115 390 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 DHPSP49366 369 aaPredicted RBP20.07■□□□□ 0.8
HDAC7-220ENST00000471235 GBE1Q04446 702 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 TAZQ16635 292 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 SPDYCQ5MJ68 293 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 SLC9A4Q6AI14 798 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 SPOCD1Q6ZMY3 1216 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 RFX6Q8HWS3 928 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 SLC41A1Q8IVJ1 513 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 RYBPQ8N488 228 aaPredicted RBP20.07■□□□□ 0.8
HDAC7-220ENST00000471235 HDDC3Q8N4P3 179 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 PLD5Q8N7P1 536 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 TMIEQ8NEW7 156 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 RUBCNQ92622 972 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 FAM131CQ96AQ9 280 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 VOPP1Q96AW1 172 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 ARRDC3Q96B67 414 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 PDLIM2Q96JY6 352 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 EXOC2Q96KP1 924 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 HEPHQ9BQS7 1158 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 TSGA10Q9BZW7 698 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 BTBD1Q9H0C5 482 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 HECAQ9UBI9 543 aaPredicted RBP20.07■□□□□ 0.8
HDAC7-220ENST00000471235 NCKAP1Q9Y2A7 1128 aa20.07■□□□□ 0.8
HDAC7-220ENST00000471235 ZFHX2Q9C0A1 2572 aaPredicted RBP20.06■□□□□ 0.8
HDAC7-220ENST00000471235 KPNA3O00505 521 aaPredicted RBP20.06■□□□□ 0.8
HDAC7-220ENST00000471235 LEFTY1O75610 366 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 PALMO75781 387 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 SEMA4FO95754 770 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 PEX11BO96011 259 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 CCDC175P0C221 793 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 CTNNA2P26232 953 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 GKP32189 559 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 SFSWAPQ12872 951 aaKnown RBP20.06■□□□□ 0.8
HDAC7-220ENST00000471235 RFTN1Q14699 578 aaPredicted RBP20.06■□□□□ 0.8
HDAC7-220ENST00000471235 ARSIQ5FYB1 569 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 TMCO4Q5TGY1 634 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 CYP2U1Q7Z449 544 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 NT5DC3Q86UY8 548 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 ALYREFQ86V81 257 aaKnown RBP20.06■□□□□ 0.8
HDAC7-220ENST00000471235 DCLK2Q8N568 766 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.06■□□□□ 0.8
HDAC7-220ENST00000471235 TMEM131Q92545 1883 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 HSPA12BQ96MM6 686 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 ZNF599Q96NL3 588 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 HINFPQ9BQA5 517 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 TRPM6Q9BX84 2022 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 NEUROG2Q9H2A3 272 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 SGK2Q9HBY8 427 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.06■□□□□ 0.8
HDAC7-220ENST00000471235 PCDH15Q96QU1 1955 aa20.06■□□□□ 0.8
HDAC7-220ENST00000471235 KRIT1O00522 736 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 APOL1O14791 398 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 GARSP41250 739 aaKnown RBP20.05■□□□□ 0.8
HDAC7-220ENST00000471235 RGRP47804 291 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 ADPRHP54922 357 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 CREB5Q02930 508 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 ZNF33AQ06730 810 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 CNTN1Q12860 1018 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 SLC10A2Q12908 348 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-220ENST00000471235 LBRQ14739 615 aaKnown RBP20.05■□□□□ 0.8
HDAC7-220ENST00000471235 AGBL4Q5VU57 503 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms