RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ACTR5Q9H9F9 607 aaPredicted RBP4.32□□□□□ -1.72
PRPF3-204ENST00000470824 SNTG1Q9NSN8 517 aa4.32□□□□□ -1.72
PRPF3-204ENST00000470824 C20orf141Q9NUB4 165 aa4.32□□□□□ -1.72
PRPF3-204ENST00000470824 SEPT11Q9NVA2 429 aaKnown RBP4.32□□□□□ -1.72
PRPF3-204ENST00000470824 HCFC1R1Q9NWW0 138 aa4.32□□□□□ -1.72
PRPF3-204ENST00000470824 EHD2Q9NZN4 543 aa4.32□□□□□ -1.72
PRPF3-204ENST00000470824 KIAA1456Q9P272 454 aa4.32□□□□□ -1.72
PRPF3-204ENST00000470824 LIMA1Q9UHB6 759 aaKnown RBP4.32□□□□□ -1.72
PRPF3-204ENST00000470824 ZNHIT2Q9UHR6 403 aa4.32□□□□□ -1.72
PRPF3-204ENST00000470824 VPS28Q9UK41 221 aa4.32□□□□□ -1.72
PRPF3-204ENST00000470824 DMRT1Q9Y5R6 373 aa4.32□□□□□ -1.72
PRPF3-204ENST00000470824 RUSC2Q8N2Y8 1516 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 MST1RQ04912 1400 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 RSF1Q96T23 1441 aaPredicted RBP4.31□□□□□ -1.72
PRPF3-204ENST00000470824 ZNF335Q9H4Z2 1342 aaPredicted RBP4.31□□□□□ -1.72
PRPF3-204ENST00000470824 LRRC3CA6NJW4 275 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 C2CD4BA6NLJ0 364 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 TIMM44O43615 452 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 NEURL1O76050 574 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 IRF1P10914 325 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 SLC2A4P14672 509 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 ZNF8P17098 575 aaPredicted RBP4.31□□□□□ -1.72
PRPF3-204ENST00000470824 YWHAQP27348 245 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 POU1F1P28069 291 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 MAPK4P31152 587 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 ICAM3P32942 547 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 HOXD13P35453 343 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 OLR1P78380 273 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 PMPCAQ10713 525 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 TMEM115Q12893 351 aaPredicted RBP4.31□□□□□ -1.72
PRPF3-204ENST00000470824 KLF10Q13118 480 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 ALG10Q5BKT4 473 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 ALG10BQ5I7T1 473 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 SERTAD4-AS1Q5TG53 156 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 STRIP1Q5VSL9 837 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 ISM2Q6H9L7 571 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 MIS18BP1Q6P0N0 1132 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 AAGABQ6PD74 315 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 MOB3CQ70IA8 216 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 IKBIPQ70UQ0 350 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 FAM57BQ71RH2 274 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 UBE2Q1Q7Z7E8 422 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 CADM4Q8NFZ8 388 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.31□□□□□ -1.72
PRPF3-204ENST00000470824 HASPINQ8TF76 798 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 SMARCE1Q969G3 411 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 PIMREGQ9BSJ6 248 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 HEMGNQ9BXL5 484 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 ZNF304Q9HCX3 659 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 CLIC5Q9NZA1 410 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 NRBP1Q9UHY1 535 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 LAMP3Q9UQV4 416 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.31□□□□□ -1.72
PRPF3-204ENST00000470824 KCNE2Q9Y6J6 123 aa4.31□□□□□ -1.72
PRPF3-204ENST00000470824 WDR17Q8IZU2 1322 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 LRRC53A6NM62 1247 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 LINC01548A6NM66 108 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 FAM157AC9JC47 383 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 RHODO00212 210 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 LDLRAD4O15165 306 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 RNMTO43148 476 aaKnown RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 PRPF4O43172 522 aaKnown RBP eCLIP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 UGDHO60701 494 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 TMCC1O94876 653 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 MLYCDO95822 493 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 GABRB2P47870 512 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 CLCNKBP51801 687 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 GOLGA8DPQ0D2H9 430 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 SLC10A2Q12908 348 aaPredicted RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 CUL4AQ13619 759 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 VEPH1Q14D04 833 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 ME3Q16798 604 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 SLC9C1Q4G0N8 1177 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 RILPL1Q5EBL4 403 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 TTC39AQ5SRH9 613 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 MEX3CQ5U5Q3 659 aaKnown RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 TBC1D9BQ66K14 1250 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 CPLX2Q6PUV4 134 aaKnown RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 PCSK4Q6UW60 755 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 C16orf54Q6UWD8 224 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 GPAT4Q86UL3 456 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 TTC39CQ8N584 583 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 BOLLQ8N9W6 283 aaKnown RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 FAM98AQ8NCA5 519 aaKnown RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 NEK9Q8TD19 979 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 TMEM170AQ8WVE7 144 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 FAM149B1Q96BN6 582 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 INTS12Q96CB8 462 aaKnown RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 FAM118BQ9BPY3 351 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 H2AFJQ9BTM1 129 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 SCNM1Q9BWG6 230 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 TBC1D29Q9UFV1 150 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 CDH22Q9UJ99 828 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 UTS2RQ9UKP6 389 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 CORO1CQ9ULV4 474 aaPredicted RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 A4GNTQ9UNA3 340 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 TTLL3Q9Y4R7 772 aa4.3□□□□□ -1.72
PRPF3-204ENST00000470824 ZCCHC6Q5VYS8 1495 aaKnown RBP4.3□□□□□ -1.72
PRPF3-204ENST00000470824 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms