RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CLPBQ9H078 707 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 LRRN3Q9H3W5 708 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 MMRN2Q9H8L6 949 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 GULP1Q9UBP9 304 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 OR51B4Q9Y5P0 310 aa12.26□□□□□ -0.45
LSM2-209ENST00000470083 RNF103O00237 685 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 PIK3R2O00459 728 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 MTSS1O43312 755 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 FBXO21O94952 628 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 SRCP12931 536 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 KRT13P13646 458 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 GTF2H1P32780 548 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 ATP1A2P50993 1020 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 NEK3P51956 506 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 MAPK10P53779 464 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 STK4Q13043 487 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 SGCGQ13326 291 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 PTK2BQ14289 1009 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 ZC3H12AQ5D1E8 599 aaKnown RBP12.25□□□□□ -0.45
LSM2-209ENST00000470083 RABGAP1LQ5R372 815 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 TMEM164Q5U3C3 297 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 LVRNQ6Q4G3 990 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 DENND6BQ8NEG7 585 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 OR6C4Q8NGE1 309 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 OR52K2Q8NGK3 314 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 PCDH19Q8TAB3 1148 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 GRIN3AQ8TCU5 1115 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 SCG3Q8WXD2 468 aaKnown RBP12.25□□□□□ -0.45
LSM2-209ENST00000470083 JPH3Q8WXH2 748 aaPredicted RBP12.25□□□□□ -0.45
LSM2-209ENST00000470083 EEF2KMTQ96G04 330 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 PRMT1Q99873 361 aaKnown RBP12.25□□□□□ -0.45
LSM2-209ENST00000470083 C1QTNF2Q9BXJ5 285 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 SIRPGQ9P1W8 387 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 VPS28Q9UK41 221 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 PNMA8BQ9ULN7 279 aaPredicted RBP12.25□□□□□ -0.45
LSM2-209ENST00000470083 FADS3Q9Y5Q0 445 aa12.25□□□□□ -0.45
LSM2-209ENST00000470083 ZFC3H1O60293 1989 aaKnown RBP12.25□□□□□ -0.45
LSM2-209ENST00000470083 CRYBG3Q68DQ2 2970 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 M0QYT0 321 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 AP1G1O43747 822 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 CD2BP2O95400 341 aaKnown RBP12.24□□□□□ -0.45
LSM2-209ENST00000470083 MT-CO1P00395 513 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 VDRP11473 427 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 PDIA4P13667 645 aaKnown RBP12.24□□□□□ -0.45
LSM2-209ENST00000470083 ADRB3P13945 408 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 ITGB7P26010 798 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 RECQLP46063 649 aaPredicted RBP12.24□□□□□ -0.45
LSM2-209ENST00000470083 NASPP49321 788 aaPredicted RBP12.24□□□□□ -0.45
LSM2-209ENST00000470083 THOP1P52888 689 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 CUL4BQ13620 913 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 ARSIQ5FYB1 569 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 FHL5Q5TD97 284 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 FAXCQ5TGI0 409 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 LCLAT1Q6UWP7 414 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 CCNJLQ8IV13 435 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 FSTL5Q8N475 847 aaPredicted RBP12.24□□□□□ -0.45
LSM2-209ENST00000470083 CHST14Q8NCH0 376 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 FBXL13Q8NEE6 735 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 GPBAR1Q8TDU6 330 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 SSC4DQ8WTU2 575 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 ASB12Q8WXK4 309 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 NKD1Q969G9 470 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 HSFY1Q96LI6 401 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 RAB20Q9NX57 234 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 IL36AQ9UHA7 158 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 KIAA1257Q9ULG3 409 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 DOLKQ9UPQ8 538 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 TRAF3IP3Q9Y228 551 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 POLQO75417 2590 aa12.24□□□□□ -0.45
LSM2-209ENST00000470083 CACNA1DQ01668 2161 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 IGLON5A6NGN9 336 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 ZNF891A8MT65 544 aaPredicted RBP12.23□□□□□ -0.45
LSM2-209ENST00000470083 KCNU1A8MYU2 1149 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 K7ERQ8 282 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 AGRPO00253 132 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 CALUO43852 315 aaPredicted RBP12.23□□□□□ -0.45
LSM2-209ENST00000470083 LEFTY1O75610 366 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 CELA2BP08218 269 aaPredicted RBP12.23□□□□□ -0.45
LSM2-209ENST00000470083 LIFP15018 202 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 MXI1P50539 228 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 PPARDQ03181 441 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 CENPCQ03188 943 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 KLRB1Q12918 225 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 ELOCQ15369 112 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 LACTB2Q53H82 288 aaPredicted RBP12.23□□□□□ -0.45
LSM2-209ENST00000470083 MACC1Q6ZN28 852 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 BEND5Q7L4P6 421 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 SLITRK4Q8IW52 837 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 FAM186BQ8IYM0 893 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 ATP6V0D2Q8N8Y2 350 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 ATP11CQ8NB49 1132 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 FAM149B1Q96BN6 582 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 CDH19Q9H159 772 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 EXOC1Q9NV70 894 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 APPL1Q9UKG1 709 aa12.23□□□□□ -0.45
LSM2-209ENST00000470083 PRR19A6NJB7 356 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 POLR2DO15514 142 aaKnown RBP12.22□□□□□ -0.45
LSM2-209ENST00000470083 SART1O43290 800 aaKnown RBP12.22□□□□□ -0.45
LSM2-209ENST00000470083 KLRC4O43908 158 aa12.22□□□□□ -0.45
LSM2-209ENST00000470083 IGLV3-25P01717 112 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms