RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 TRAV19A0A0A6YYK7 116 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-208ENST00000468300 RAMP2O60895 175 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 ZMPSTE24O75844 475 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 NRIP1P48552 1158 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 CLK1P49759 484 aaKnown RBP8.41□□□□□ -1.06
BRCA1-208ENST00000468300 YBEYP58557 167 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-208ENST00000468300 GNA12Q03113 381 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 HNRNPDQ14103 355 aaKnown RBP8.41□□□□□ -1.06
BRCA1-208ENST00000468300 GPR158Q5T848 1215 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 LEKR1Q6ZMV7 388 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 CPXM2Q8N436 756 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 ARRDC2Q8TBH0 407 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 RSPRY1Q96DX4 576 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 TMEM165Q9HC07 324 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 GLOD4Q9HC38 313 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 ATP13A1Q9HD20 1204 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 UBP1Q9NZI7 540 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 CHMP2BQ9UQN3 213 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 TTLL3Q9Y4R7 772 aa8.41□□□□□ -1.06
BRCA1-208ENST00000468300 DENND4AQ7Z401 1863 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 ARHGAP42A6NI28 874 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 USP12O75317 370 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 CLDN11O75508 207 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 S100BP04271 92 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-208ENST00000468300 MLNP12872 115 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 ACTN2P35609 894 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 EIF3BP55884 814 aaKnown RBP8.4□□□□□ -1.06
BRCA1-208ENST00000468300 CRADDP78560 199 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 ARF5P84085 180 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 CDK16Q00536 496 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 IL10RBQ08334 325 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 BBS9Q3SYG4 887 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 CCDC38Q502W7 563 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 EMC10Q5UCC4 262 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 FYB2Q5VWT5 728 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 PPP2R2DQ66LE6 453 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 KCTD16Q68DU8 428 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 ALG1LQ6GMV1 187 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 TIGD7Q6NT04 549 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-208ENST00000468300 KDELC1Q6UW63 502 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 ELMOD1Q8N336 334 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 CENPTQ96BT3 561 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 MRGPRX2Q96LB1 330 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 SMYD2Q9NRG4 433 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 MYOFQ9NZM1 2061 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 CEP290O15078 2479 aa8.4□□□□□ -1.06
BRCA1-208ENST00000468300 A0A1B0GVM2 712 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 ILVBLA1L0T0 632 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 PABPN1LA6NDY0 278 aaKnown RBP8.4□□□□□ -1.07
BRCA1-208ENST00000468300 TCAF2A6NFQ2 919 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 PRSS47A8MTI9 375 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 LINC01565O15544 149 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 KDELR3O43731 214 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF189O75820 626 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-208ENST00000468300 KRT38O76015 456 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 MZF1P28698 734 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-208ENST00000468300 TAGLNQ01995 201 aaKnown RBP8.4□□□□□ -1.07
BRCA1-208ENST00000468300 ZNF77Q15935 545 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 RABGAP1LQ5R372 815 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 STEAP4Q687X5 459 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 SETD3Q86TU7 594 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-208ENST00000468300 PDIK1LQ8N165 341 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 KIAA1958Q8N8K9 716 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 OR52K1Q8NGK4 314 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 SH3RF2Q8TEC5 729 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 PGM2Q96G03 612 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 IMP4Q96G21 291 aaKnown RBP8.4□□□□□ -1.07
BRCA1-208ENST00000468300 ATP6V1G3Q96LB4 118 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 MAGEH1Q9H213 219 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 TASP1Q9H6P5 420 aa8.4□□□□□ -1.07
BRCA1-208ENST00000468300 RBM22Q9NW64 420 aaKnown RBP eCLIP8.4□□□□□ -1.07
BRCA1-208ENST00000468300 SOBPA7XYQ1 873 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 GOLGA8KD6RF30 607 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 TBL1XO60907 577 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 CKMP06732 381 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 DDX6P26196 483 aaKnown RBP eCLIP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 MMP13P45452 471 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 RGRP47804 291 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 MAXP61244 160 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 USP4Q13107 963 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 COL19A1Q14993 1142 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 PLEKHG6Q3KR16 790 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 TMEM184AQ6ZMB5 413 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 UNC5AQ6ZN44 842 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 C3orf62Q6ZUJ4 267 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 MZB1Q8WU39 189 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ATP2A3Q93084 1043 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 TTC25Q96NG3 672 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 EBNA1BP2Q99848 306 aaKnown RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 FRMD8Q9BZ67 464 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-208ENST00000468300 LMAN2LQ9H0V9 348 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 IKBKGQ9Y6K9 419 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ANKRD36A6QL64 1941 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 TCRBV9S1A1TA0A576 114 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 ANKRD33BA6NCL7 494 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 FGF19O95750 216 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 AGTP01019 485 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 SLCO1A2P46721 670 aa8.39□□□□□ -1.07
BRCA1-208ENST00000468300 SKOR1P84550 965 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms