RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 CPPED1Q9BRF8 314 aaPredicted RBP4.5□□□□□ -1.69
SSR3-204ENST00000467733 SOX7Q9BT81 388 aa4.5□□□□□ -1.69
SSR3-204ENST00000467733 GPR88Q9GZN0 384 aa4.5□□□□□ -1.69
SSR3-204ENST00000467733 DHX33Q9H6R0 707 aaKnown RBP4.5□□□□□ -1.69
SSR3-204ENST00000467733 ASAH2Q9NR71 780 aa4.5□□□□□ -1.69
SSR3-204ENST00000467733 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.5□□□□□ -1.69
SSR3-204ENST00000467733 DKK4Q9UBT3 224 aa4.5□□□□□ -1.69
SSR3-204ENST00000467733 ATP8A1Q9Y2Q0 1164 aa4.5□□□□□ -1.69
SSR3-204ENST00000467733 RAI2Q9Y5P3 530 aa4.5□□□□□ -1.69
SSR3-204ENST00000467733 ANK1P16157 1881 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 RNASET2O00584 256 aaKnown RBP4.49□□□□□ -1.69
SSR3-204ENST00000467733 PTGESO14684 152 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 ASAP2O43150 1006 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 PSMD10O75832 226 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 STC2O76061 302 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 ABLIM3O94929 683 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 PRKCBP05771 671 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 THP07101 528 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 MYL4P12829 197 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 TYRP1P17643 537 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 ARF4P18085 180 aaPredicted RBP4.49□□□□□ -1.69
SSR3-204ENST00000467733 ELF1P32519 619 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 WNT3AP56704 352 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 SCAND1P57086 179 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 PTENP60484 403 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 PSMC5P62195 406 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 BLOC1S1P78537 153 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 MBTD1Q05BQ5 628 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 CD69Q07108 199 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 NCBP1Q09161 790 aaKnown RBP4.49□□□□□ -1.69
SSR3-204ENST00000467733 GRSF1Q12849 480 aaKnown RBP eCLIP4.49□□□□□ -1.69
SSR3-204ENST00000467733 HNRNPDQ14103 355 aaKnown RBP4.49□□□□□ -1.69
SSR3-204ENST00000467733 EMC2Q15006 297 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 TEAD2Q15562 447 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 ITPRIPL2Q3MIP1 535 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 PAPD7Q5XG87 772 aaKnown RBP4.49□□□□□ -1.69
SSR3-204ENST00000467733 TPGS2Q68CL5 300 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 SLC27A1Q6PCB7 646 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 B3GNT9Q6UX72 402 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 CCNI2Q6ZMN8 369 aaPredicted RBP4.49□□□□□ -1.69
SSR3-204ENST00000467733 DDX42Q86XP3 938 aaKnown RBP eCLIP4.49□□□□□ -1.69
SSR3-204ENST00000467733 FANCBQ8NB91 859 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 OR52N2Q8NGI0 321 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 ZNF461Q8TAF7 563 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 MDM1Q8TC05 714 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 TCP11Q8WWU5 503 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 TMEM143Q96AN5 459 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 ZFYVE19Q96K21 471 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 NUSAP1Q9BXS6 441 aaKnown RBP4.49□□□□□ -1.69
SSR3-204ENST00000467733 ZMYND12Q9H0C1 365 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 ZNF768Q9H5H4 540 aaKnown RBP4.49□□□□□ -1.69
SSR3-204ENST00000467733 RBM28Q9NW13 759 aaKnown RBP4.49□□□□□ -1.69
SSR3-204ENST00000467733 C14orf119Q9NWQ9 140 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 OBP2AQ9NY56 170 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 GTSE1Q9NYZ3 720 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 TMPRSS11EQ9UL52 423 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 EDARQ9UNE0 448 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 AHCTF1Q8WYP5 2266 aa4.49□□□□□ -1.69
SSR3-204ENST00000467733 TLN1Q9Y490 2541 aaKnown RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 SPTBN1Q01082 2364 aaKnown RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 A0A087WV48 116 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 A0A1W2PR48 441 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 AHRRA9YTQ3 701 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 J3QKU1 62 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 TRDMT1O14717 391 aaKnown RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 ADAMTS3O15072 1205 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 B4GALT5O43286 388 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 HOXA3O43365 443 aaPredicted RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 TRAPPC3O43617 180 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 PRKD3O94806 890 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 SEC24AO95486 1093 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 LTA4HP09960 611 aaKnown RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 FTH1P19P0C7X4 201 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 GJA1P17302 382 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 ENGP17813 658 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 BCKDHBP21953 392 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 MCM5P33992 734 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 HOXD12P35452 270 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 DPP6P42658 865 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 DHPSP49366 369 aaPredicted RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 MCM2P49736 904 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 SLC5A3P53794 718 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 ELLP55199 621 aaPredicted RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 FAM193AP78312 1265 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 DUSP2Q05923 314 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 POU5F1BQ06416 359 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 TWF1Q12792 350 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 HDAC1Q13547 482 aaPredicted RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 CAPSQ13938 189 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 TFDP1Q14186 410 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 TRIM25Q14258 630 aaKnown RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 DMC1Q14565 340 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 MXD4Q14582 209 aaPredicted RBP4.48□□□□□ -1.69
SSR3-204ENST00000467733 FAM214AQ32MH5 1076 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 FBXO43Q4G163 708 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 FBXO42Q6P3S6 717 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 APOA5Q6Q788 366 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 LHFPL2Q6ZUX7 228 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 DOK3Q7L591 496 aa4.48□□□□□ -1.69
SSR3-204ENST00000467733 SYT13Q7L8C5 426 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms