RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 POU1F1P28069 291 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 ARL3P36405 182 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 CPOXP36551 454 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 PTPN9P43378 593 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 GPR12P47775 334 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 HARS2P49590 506 aaKnown RBP5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 CTCFP49711 727 aaPredicted RBP5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 ARSFP54793 590 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 SETQ01105 290 aaPredicted RBP5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 MAMLD1Q13495 774 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 DAZAP2Q15038 168 aaPredicted RBP5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 GSTA3Q16772 222 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 SLC9B1Q4ZJI4 515 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 CEP78Q5JTW2 689 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 PAPD7Q5XG87 772 aaKnown RBP5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 ATG9BQ674R7 924 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 ANKRD52Q8NB46 1076 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 SLC44A5Q8NCS7 719 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 DPF1Q92782 380 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 ZNF333Q96JL9 665 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 CHCHD6Q9BRQ6 235 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 SLC32A1Q9H598 525 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 PRKRIP1Q9H875 184 aaPredicted RBP5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 PDGFCQ9NRA1 345 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 KLHL13Q9P2N7 655 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 NLKQ9UBE8 527 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 UTS2RQ9UKP6 389 aa5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 FNDC1Q4ZHG4 1894 aaPredicted RBP5.38□□□□□ -1.55
GAPVD1-211ENST00000467707 A0A096LPK6 155 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 TRBV5-3A0A0A0MS03 114 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 SMIM35A0A1B0GVV1 85 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 PABPN1LA6NDY0 278 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 NPIPB15A6NHN6 443 aaPredicted RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 FAM157AC9JC47 383 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 TAF4O00268 1085 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 EBAG9O00559 213 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 CNOT3O75175 753 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 RBMXL2O75526 392 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 RNASEH2AO75792 299 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 HSP90AA1P07900 732 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 UNGP13051 313 aaPredicted RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 ZNF8P17098 575 aaPredicted RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 EPHB2P29323 1055 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 CENPAP49450 140 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 HMGA2P52926 109 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 TAF11Q15544 211 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 TBCEQ15813 527 aaPredicted RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 CCNG2Q16589 344 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 FBXO43Q4G163 708 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 MIDNQ504T8 468 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 GPATCH4Q5T3I0 446 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 UBAP2Q5T6F2 1119 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 ZNF793Q6ZN11 406 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 RPAP2Q8IXW5 612 aaPredicted RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 FAM149B1Q96BN6 582 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 ZG16BQ96DA0 208 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 KLHL15Q96M94 604 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 H2AFJQ9BTM1 129 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 SCNM1Q9BWG6 230 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 PRSS22Q9GZN4 317 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 MUC13Q9H3R2 512 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 CXorf56Q9H5V9 222 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 TASP1Q9H6P5 420 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 SPAG4Q9NPE6 437 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 PNRC2Q9NPJ4 139 aaKnown RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 C20orf141Q9NUB4 165 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 CDH22Q9UJ99 828 aa5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 COL11A2P13942 1736 aaPredicted RBP5.37□□□□□ -1.55
GAPVD1-211ENST00000467707 FSD2A1L4K1 749 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 TARSL2A2RTX5 802 aaKnown RBP5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 K7ENM7 598 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 TLX3O43711 291 aaPredicted RBP5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 MMP3P08254 477 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 PCNAP12004 261 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 DPP6P42658 865 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 INHBEP58166 350 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 RPS3AP61247 264 aaKnown RBP5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 HIST2H2ACQ16777 129 aaPredicted RBP5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 ME3Q16798 604 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 SYTL3Q4VX76 610 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 ITPRIPL1Q6GPH6 555 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 SLC18B1Q6NT16 456 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 CFAP161Q6P656 301 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 FASTKD5Q7L8L6 764 aaKnown RBP5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 SLC46A3Q7Z3Q1 461 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 SERPINA11Q86U17 422 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 ANKRD13BQ86YJ7 626 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 OR4N2Q8NGD1 307 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 PIGOQ8TEQ8 1089 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 GDPD5Q8WTR4 605 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 USP44Q9H0E7 712 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 TMPRSS5Q9H3S3 457 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 THSD1Q9NS62 852 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 SNTG1Q9NSN8 517 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 NSMCE4AQ9NXX6 385 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 NCKIPSDQ9NZQ3 722 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 SEL1LQ9UBV2 794 aa5.36□□□□□ -1.55
GAPVD1-211ENST00000467707 HSPB7Q9UBY9 170 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms