RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 MANEALQ5VSG8 457 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 LINGO4Q6UY18 593 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 IQCHQ86VS3 1027 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 SH2D3CQ8N5H7 860 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 PNPLA1Q8N8W4 532 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 FAM131CQ96AQ9 280 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 ELF4Q99607 663 aaPredicted RBP14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 THAP2Q9H0W7 228 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 RBSNQ9H1K0 784 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 DEF6Q9H4E7 631 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 ATP13A1Q9HD20 1204 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 GDF3Q9NR23 364 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 NDFIP2Q9NV92 336 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 TMEM248Q9NWD8 314 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 ZNF212Q9UDV6 495 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 VPS51Q9UID3 782 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 PCDHGA1Q9Y5H4 931 aa14.36□□□□□ -0.11
CCHCR1-211ENST00000467553 TP53BP1Q12888 1972 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 FAM47DPA6NHR8 397 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 C1QTNF3-AMACRE9PGA6 284 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 H0Y8X5 98 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 K7ERQ8 282 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 LATO43561 262 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 PRPSAP2O60256 369 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 IL1BP01584 269 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 SRCP12931 536 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 MIPP30301 263 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 ACVRL1P37023 503 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 PSMD8P48556 350 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 ARRB1P49407 418 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 ADPRHP54922 357 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 AIF1P55008 147 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 SMAD1Q15797 465 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 ZNF783Q6ZMS7 281 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 Q6ZVU0 165 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 PRPF39Q86UA1 669 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 NLRP14Q86W24 1093 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 ARFGAP1Q8N6T3 406 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 DCAF4L2Q8NA75 395 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 OR14C36Q8NHC7 312 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 FNIP1Q8TF40 1166 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 FRS2Q8WU20 508 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 OR8D1Q8WZ84 308 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 DNAJC7Q99615 494 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 CHP1Q99653 195 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 EPAS1Q99814 870 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 NUP85Q9BW27 656 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 DHX35Q9H5Z1 703 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 RETREG1Q9H6L5 497 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 FTSJ1Q9UET6 329 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 SERGEFQ9UGK8 458 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 AP4E1Q9UPM8 1137 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 DMTF1Q9Y222 760 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 SLCO1B1Q9Y6L6 691 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 PLXNA2O75051 1894 aa14.35□□□□□ -0.11
CCHCR1-211ENST00000467553 NBEAQ8NFP9 2946 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 AKR1B15C9JRZ8 316 aaPredicted RBP14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 SMAD6O43541 496 aaKnown RBP14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 AKR1B10O60218 316 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 RNGTTO60942 597 aaKnown RBP14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 ATXN1LP0C7T5 689 aaKnown RBP14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 RXRGP48443 463 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 MAPKAPK2P49137 400 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 POLD3Q15054 466 aaPredicted RBP14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 CA9Q16790 459 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 RETSATQ6NUM9 610 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 SARM1Q6SZW1 724 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 ZNF354CQ86Y25 554 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 AADATQ8N5Z0 425 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 MFSD2AQ8NA29 543 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 ARHGEF2Q92974 986 aaKnown RBP14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 ARHGEF26Q96DR7 871 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 BTBD6Q96KE9 485 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 CCDC114Q96M63 670 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 SLC6A18Q96N87 628 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 PEBP4Q96S96 227 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 NCAPGQ9BPX3 1015 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 CATSPERBQ9H7T0 1116 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 AASDHPPTQ9NRN7 309 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 ABHD10Q9NUJ1 306 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 HPCAL4Q9UM19 191 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 HS3ST2Q9Y278 367 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 ACTL7AQ9Y615 435 aa14.34□□□□□ -0.11
CCHCR1-211ENST00000467553 TBC1D3DA0A087WVF3 549 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TBC1D3IA0A087WXS9 549 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TBC1D3EA0A087X179 549 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TBC1D3KA0A087X1G2 549 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 A0A1W2PR77 199 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TBC1D3FA6NER0 549 aaPredicted RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TBC1D3LB9A6J9 549 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TLR4O00206 839 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 TAF4O00268 1085 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 EEF2KO00418 725 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 MCF2LO15068 1137 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 DAPK3O43293 454 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 RAMP2O60895 175 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 MFAP3LO75121 409 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 LRCH4O75427 683 aa14.33□□□□□ -0.12
CCHCR1-211ENST00000467553 CYP1A2P05177 515 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms