RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 CXorf57Q6NSI4 855 aaKnown RBP16.11■□□□□ 0.17
TSSC4-208ENST00000467308 NEK5Q6P3R8 708 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 PCSK4Q6UW60 755 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 RAD9BQ6WBX8 426 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 KDM7AQ6ZMT4 941 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 ZNF571Q7Z3V5 609 aaPredicted RBP16.11■□□□□ 0.17
TSSC4-208ENST00000467308 TMEM110Q86TL2 294 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 VPS36Q86VN1 386 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 LSMEM2Q8N112 164 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 ALG14Q96F25 216 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 WBP1Q96G27 269 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 HIC2Q96JB3 615 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 LGMNQ99538 433 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 EIF3CQ99613 913 aaKnown RBP16.11■□□□□ 0.17
TSSC4-208ENST00000467308 KLHL11Q9NVR0 708 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 SLC25A13Q9UJS0 675 aa16.11■□□□□ 0.17
TSSC4-208ENST00000467308 DXOO77932 396 aaKnown RBP16.1■□□□□ 0.17
TSSC4-208ENST00000467308 NDUFA10O95299 355 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 PLEKP08567 350 aaPredicted RBP16.1■□□□□ 0.17
TSSC4-208ENST00000467308 CKMT1AP12532 417 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 USP8P40818 1118 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 UCNP55089 124 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 TAS2R38P59533 333 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 CDR2Q01850 454 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 MTA1Q13330 715 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 SLC18A3Q16572 532 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 ACCSLQ4AC99 568 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 SLC47A2Q86VL8 602 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 CIR1Q86X95 450 aaPredicted RBP16.1■□□□□ 0.17
TSSC4-208ENST00000467308 SLC30A5Q8TAD4 765 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 AGPAT1Q99943 283 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 FEM1AQ9BSK4 669 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 NENFQ9UMX5 172 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 TENM4Q6N022 2769 aa16.1■□□□□ 0.17
TSSC4-208ENST00000467308 E5RJQ4 531 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 MED7O43513 233 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 GP1BAP07359 652 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 THEGLP0DJG4 465 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 CCR1P32246 355 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 NUMBP49757 651 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 TMPRSS3P57727 454 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 ERVPABLB-1P60509 514 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 RHDQ02161 417 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 CCDC15Q0P6D6 951 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 DLG2Q15700 870 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 BROXQ5VW32 411 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 DENND1BQ6P3S1 775 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 TRIM72Q6ZMU5 477 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 Q6ZVU0 165 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 NOP9Q86U38 636 aaKnown RBP16.09■□□□□ 0.17
TSSC4-208ENST00000467308 SH2D3CQ8N5H7 860 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 IFT43Q96FT9 208 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 DEPDC7Q96QD5 511 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 USP29Q9HBJ7 922 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 UCKL1Q9NWZ5 548 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.09■□□□□ 0.17
TSSC4-208ENST00000467308 PCDHGC3Q9UN70 934 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 CA5BQ9Y2D0 317 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 PCDHB1Q9Y5F3 818 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 OR51B4Q9Y5P0 310 aa16.09■□□□□ 0.17
TSSC4-208ENST00000467308 AKR1B10O60218 316 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 OPA1O60313 960 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 ALPPL2P10696 532 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 GZMAP12544 262 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 CHRNB2P17787 502 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 GNA15P30679 374 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 LSSP48449 732 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 PITX1P78337 314 aaPredicted RBP16.08■□□□□ 0.16
TSSC4-208ENST00000467308 KRT83P78385 493 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 POM121L1PQ3SYA9 428 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 PIP5KL1Q5T9C9 394 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 FBXL22Q6P050 247 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 ZSCAN30Q86W11 494 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 FAM181AQ8N9Y4 354 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 KIAA1524Q8TCG1 905 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 RPRD1AQ96P16 312 aaPredicted RBP16.08■□□□□ 0.16
TSSC4-208ENST00000467308 DEF6Q9H4E7 631 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 FAM204AQ9H8W3 233 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 NLGN3Q9NZ94 848 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 HS3ST2Q9Y278 367 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 ADGRG1Q9Y653 693 aa16.08■□□□□ 0.16
TSSC4-208ENST00000467308 TRPM6Q9BX84 2022 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 A0A087X0T9 212 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.07■□□□□ 0.16
TSSC4-208ENST00000467308 A0A1W2PQU0 124 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 NEMP2A6NFY4 417 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 J3QKU1 62 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 DDX3XO00571 662 aaKnown RBP eCLIP16.07■□□□□ 0.16
TSSC4-208ENST00000467308 SLC31A1O15431 190 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 FFAR2O15552 330 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 LZTS3O60299 673 aaPredicted RBP16.07■□□□□ 0.16
TSSC4-208ENST00000467308 PIAS2O75928 621 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 IPO7O95373 1038 aaKnown RBP16.07■□□□□ 0.16
TSSC4-208ENST00000467308 LSM8O95777 96 aaKnown RBP16.07■□□□□ 0.16
TSSC4-208ENST00000467308 MPOP05164 745 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 GLI1P08151 1106 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 FAM228BP0C875 321 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 GIMD1P0DJR0 217 aa16.07■□□□□ 0.16
TSSC4-208ENST00000467308 TNFAIP3P21580 790 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms