RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 LRRC34Q8IZ02 419 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 LGI2Q8N0V4 545 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 SYNPOQ8N3V7 929 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 FBXL6Q8N531 539 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 PJA1Q8NG27 643 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 OLIG1Q8TAK6 271 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 RAB3IL1Q8TBN0 382 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 UCMAQ8WVF2 138 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 CENPIQ92674 756 aaPredicted RBP10.22□□□□□ -0.77
PMF1-204ENST00000466489 BHMTQ93088 406 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 WBP2Q969T9 261 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 NTAN1Q96AB6 310 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 RPRD1AQ96P16 312 aaPredicted RBP10.22□□□□□ -0.77
PMF1-204ENST00000466489 HAPLN3Q96S86 360 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 SIK2Q9H0K1 926 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 EPHX3Q9H6B9 360 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 ARHGEF4Q9NR80 690 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 ARHGEF38Q9NXL2 777 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 DONSONQ9NYP3 566 aa10.22□□□□□ -0.77
PMF1-204ENST00000466489 PSMC3IPQ9P2W1 217 aaPredicted RBP10.22□□□□□ -0.77
PMF1-204ENST00000466489 DOCK4Q8N1I0 1966 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 ZDBF2Q9HCK1 2354 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 A0A1B0GVM2 712 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 TBC1D3BA6NDS4 549 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 TCAF2A6NFQ2 919 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 FAM170BA6NMN3 283 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 ZNF487B1APH4 448 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 H0Y626 953 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 DNALI1O14645 258 aaPredicted RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 LIASO43766 372 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 TSPAN3O60637 253 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 CCDC22O60826 627 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 GPR37L1O60883 481 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 TBL1XO60907 577 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 ATG13O75143 517 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 TULP3O75386 442 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 STK10O94804 968 aaKnown RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 ACSL3O95573 720 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 PENKP01210 267 aaPredicted RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 SHBGP04278 402 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 IVDP26440 423 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 CNTFP26441 200 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 GRIA2P42262 883 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 SSR1P43307 286 aaKnown RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 ZNF135P52742 658 aaPredicted RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 HDAC4P56524 1084 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 IFI35P80217 286 aaPredicted RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 SARNPP82979 210 aaKnown RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 EIF4EBP2Q13542 120 aaPredicted RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 PDK4Q16654 411 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 HIF1AQ16665 826 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 FAM133BQ5BKY9 247 aaKnown RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 TMEM196Q5HYL7 178 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 ZFYVE27Q5T4F4 411 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 PIK3R6Q5UE93 754 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 IZUMO3Q5VZ72 239 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 ASTLQ6HA08 431 aaPredicted RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 TRNP1Q6NT89 227 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 RFWD3Q6PCD5 774 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 TRMT11Q7Z4G4 463 aaKnown RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 ADAT2Q7Z6V5 191 aaKnown RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 MFN1Q8IWA4 741 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 ALLCQ8N6M5 410 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 NAT16Q8N8M0 369 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 MTBPQ96DY7 904 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 C1orf74Q96LT6 269 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 CYTH2Q99418 400 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 EPAS1Q99814 870 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 MAK16Q9BXY0 300 aaKnown RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 CXorf56Q9H5V9 222 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 RETREG1Q9H6L5 497 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 EBF2Q9HAK2 575 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 NOD2Q9HC29 1040 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 MRGBPQ9NV56 204 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 FGFR1OP2Q9NVK5 253 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 VANGL2Q9ULK5 521 aa10.21□□□□□ -0.77
PMF1-204ENST00000466489 MTO1Q9Y2Z2 717 aaKnown RBP10.21□□□□□ -0.77
PMF1-204ENST00000466489 COL4A3Q01955 1670 aa10.21□□□□□ -0.78
PMF1-204ENST00000466489 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.2□□□□□ -0.78
PMF1-204ENST00000466489 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.2□□□□□ -0.78
PMF1-204ENST00000466489 OTOL1A6NHN0 477 aaPredicted RBP10.2□□□□□ -0.78
PMF1-204ENST00000466489 CLDN11O75508 207 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 KAT7O95251 611 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 ZFXP17010 805 aaPredicted RBP10.2□□□□□ -0.78
PMF1-204ENST00000466489 TFE3P19532 575 aaPredicted RBP10.2□□□□□ -0.78
PMF1-204ENST00000466489 AOC1P19801 751 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 CD72P21854 359 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 TARSP26639 723 aaKnown RBP10.2□□□□□ -0.78
PMF1-204ENST00000466489 SLC6A4P31645 630 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 HTR7P34969 479 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 ADRA1BP35368 520 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 PCK1P35558 622 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 OPRD1P41143 372 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 RPS9P46781 194 aaKnown RBP10.2□□□□□ -0.78
PMF1-204ENST00000466489 GALK1P51570 392 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 KDSRQ06136 332 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 SCAPQ12770 1279 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 DNAJC3Q13217 504 aa10.2□□□□□ -0.78
PMF1-204ENST00000466489 ZNF177Q13360 481 aaPredicted RBP10.2□□□□□ -0.78
PMF1-204ENST00000466489 EIF4HQ15056 248 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms