RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 TSEN2Q8NCE0 465 aaKnown RBP14.18□□□□□ -0.14
HDAC6-215ENST00000465457 CEP76Q8TAP6 659 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 CLEC4CQ8WTT0 213 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 P3H4Q92791 437 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 HAUS1Q96CS2 278 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 PGAP3Q96FM1 320 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-215ENST00000465457 RNF157Q96PX1 679 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 NPY6RQ99463 290 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 SH3GL2Q99962 352 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 SNRNP25Q9BV90 132 aaKnown RBP14.18□□□□□ -0.14
HDAC6-215ENST00000465457 TXLNGYQ9BZA5 131 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 ULBP1Q9BZM6 244 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 SLC6A17Q9H1V8 727 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 NEUROG2Q9H2A3 272 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 IL21RQ9HBE5 538 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 PCDH18Q9HCL0 1135 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 DNPEPQ9ULA0 475 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 AP4E1Q9UPM8 1137 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 PCDHB9Q9Y5E1 797 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 MGAQ8IWI9 3026 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 ATMQ13315 3056 aa14.18□□□□□ -0.14
HDAC6-215ENST00000465457 FAM149AA5PLN7 773 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 HHLA1C9JL84 531 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 LTFP02788 710 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 RARGP13631 454 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 TCF3P15923 654 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 HDCP19113 662 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 MAOBP27338 520 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 STIP1P31948 543 aaKnown RBP14.17□□□□□ -0.14
HDAC6-215ENST00000465457 HSD17B3P37058 310 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 GGCXP38435 758 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 ARL4AP40617 200 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 WASP42768 502 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 NR2C2P49116 596 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 USP46P62068 366 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 CBX1P83916 185 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 OTUD4Q01804 1114 aaKnown RBP14.17□□□□□ -0.14
HDAC6-215ENST00000465457 C19orf57Q0VDD7 668 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 GRIK2Q13002 908 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 NOMO1Q15155 1222 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 LLGL1Q15334 1064 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 PLEKHG6Q3KR16 790 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 DCAF6Q58WW2 860 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 EOGTQ5NDL2 527 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 SLC9A4Q6AI14 798 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 PM20D1Q6GTS8 502 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 VSTM1Q6UX27 236 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 C4orf22Q6V702 233 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 BZW1Q7L1Q6 419 aaKnown RBP14.17□□□□□ -0.14
HDAC6-215ENST00000465457 ZMIZ2Q8NF64 920 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 PIP4K2CQ8TBX8 421 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 ACTL9Q8TC94 416 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 NTAN1Q96AB6 310 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 PHACTR1Q9C0D0 580 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 PABPC3Q9H361 631 aaKnown RBP14.17□□□□□ -0.14
HDAC6-215ENST00000465457 ARHGEF4Q9NR80 690 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 SMPD4Q9NXE4 827 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 ANAPC5Q9UJX4 755 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 PCOLCE2Q9UKZ9 415 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 CYP8B1Q9UNU6 501 aa14.17□□□□□ -0.14
HDAC6-215ENST00000465457 H3BQF6 201 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 H3BRJ5 948 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 TRIM66O15016 1216 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 TRIM24O15164 1050 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 BEST1O76090 585 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 NUDT17P0C025 328 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 ATXN1LP0C7T5 689 aaKnown RBP14.16□□□□□ -0.14
HDAC6-215ENST00000465457 DPP6P42658 865 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 MAGEA11P43364 429 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 PMS2P54278 862 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 EIF3EP60228 445 aaKnown RBP14.16□□□□□ -0.14
HDAC6-215ENST00000465457 DEUP1Q05D60 604 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 ADCY2Q08462 1091 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 XRCC4Q13426 336 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 HNRNPDQ14103 355 aaKnown RBP14.16□□□□□ -0.14
HDAC6-215ENST00000465457 ARL13BQ3SXY8 428 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 ANKRD20A8PQ5CZ79 823 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 EFHC2Q5JST6 749 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 RHBDF2Q6PJF5 856 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 RELL1Q8IUW5 271 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 UBLCP1Q8WVY7 318 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-215ENST00000465457 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 DCBLD2Q96PD2 775 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 ZIM3Q96PE6 472 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 RNF38Q9H0F5 515 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 UXTQ9UBK9 157 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-215ENST00000465457 SHOC2Q9UQ13 582 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 PLAAQ9Y263 795 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 USP3Q9Y6I4 520 aa14.16□□□□□ -0.14
HDAC6-215ENST00000465457 NUMA1Q14980 2115 aa14.15□□□□□ -0.14
HDAC6-215ENST00000465457 A0A087WV48 116 aa14.15□□□□□ -0.14
HDAC6-215ENST00000465457 AGPSO00116 658 aa14.15□□□□□ -0.14
HDAC6-215ENST00000465457 DNALI1O14645 258 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-215ENST00000465457 SYF2O95926 243 aaKnown RBP14.15□□□□□ -0.14
HDAC6-215ENST00000465457 APODP05090 189 aa14.15□□□□□ -0.14
HDAC6-215ENST00000465457 CD48P09326 243 aa14.15□□□□□ -0.14
HDAC6-215ENST00000465457 NDUFV2P19404 249 aa14.15□□□□□ -0.14
HDAC6-215ENST00000465457 BDNFP23560 247 aa14.15□□□□□ -0.14
HDAC6-215ENST00000465457 IVDP26440 423 aa14.15□□□□□ -0.14
HDAC6-215ENST00000465457 ITPKBP27987 946 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms