RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 LHFPL2Q6ZUX7 228 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 LPCAT2Q7L5N7 544 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 NUP93Q8N1F7 819 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 LINC00301Q8NCQ3 95 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 B3GALNT2Q8NCR0 500 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 ANKRD20A12PQ8NF67 263 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 OR5B17Q8NGF7 314 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 OVCA2Q8WZ82 227 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 ERCC4Q92889 916 aaPredicted RBP6.11□□□□□ -1.43
SSBP1-204ENST00000465167 OTUB2Q96DC9 234 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 SMARCD1Q96GM5 515 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 CCDC34Q96HJ3 373 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 ZC3H10Q96K80 434 aaKnown RBP6.11□□□□□ -1.43
SSBP1-204ENST00000465167 C8orf48Q96LL4 319 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 CYP2S1Q96SQ9 504 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 PNKPQ96T60 521 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 C7orf25Q9BPX7 421 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 FGFBP2Q9BYJ0 223 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 IFT22Q9H7X7 185 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 ARFGAP3Q9NP61 516 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 DMAP1Q9NPF5 467 aaPredicted RBP6.11□□□□□ -1.43
SSBP1-204ENST00000465167 AGPAT3Q9NRZ7 376 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 PCMTD2Q9NV79 361 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 ANO10Q9NW15 660 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 SMPD4Q9NXE4 827 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 CFAP97Q9P2B7 532 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 LSM7Q9UK45 103 aaKnown RBP6.11□□□□□ -1.43
SSBP1-204ENST00000465167 MTMR6Q9Y217 621 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 FRMD4BQ9Y2L6 1034 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 THADAQ6YHU6 1953 aa6.11□□□□□ -1.43
SSBP1-204ENST00000465167 ATXN2Q99700 1313 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 PVALEFA0A1B0GWK0 134 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 E2F8A0AVK6 867 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 CCDC151A5D8V7 595 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 OTOL1A6NHN0 477 aaPredicted RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 BECN2A8MW95 431 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 TMCO5BA8MYB1 307 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 ZNF561-AS1K7EIQ3 104 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 NEMP1O14524 444 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 GPR39O43194 453 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 CALUO43852 315 aaPredicted RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 KLF8O95600 359 aaPredicted RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 CYP17A1P05093 508 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 LMO2P25791 158 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 TRHRP34981 398 aaPredicted RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 RDXP35241 583 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 EIF2DP41214 584 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 PIK3CAP42336 1068 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 AFMP43652 599 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 NOVA1P51513 510 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 ATXN3P54252 364 aaPredicted RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 JAM2P57087 298 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 SLC7A9P82251 487 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 GAD2Q05329 585 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 KDSRQ06136 332 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 LMAN2Q12907 356 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 TAF10Q12962 218 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 E2F5Q15329 346 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 ARHGAP44Q17R89 818 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 KNOP1Q1ED39 458 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 ANO4Q32M45 955 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 PLEKHG6Q3KR16 790 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 PLK5Q496M5 336 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 HECTD3Q5T447 861 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 RNF219Q5W0B1 726 aaPredicted RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 ATL3Q6DD88 541 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 SCARA5Q6ZMJ2 495 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 RABEPKQ7Z6M1 372 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 TADA2BQ86TJ2 420 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 LILRA2Q8N149 483 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 CCDC33Q8N5R6 958 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 NEK11Q8NG66 645 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 SCFD1Q8WVM8 642 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 KBTBD7Q8WVZ9 684 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 HPS3Q969F9 1004 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 CNOT6LQ96LI5 555 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 XPO6Q96QU8 1125 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 PKMYT1Q99640 499 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 MRPL45Q9BRJ2 306 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 TTLL2Q9BWV7 592 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 NUSAP1Q9BXS6 441 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 TPSD1Q9BZJ3 242 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 FBXO44Q9H4M3 255 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 SMURF1Q9HCE7 757 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 SLC6A20Q9NP91 592 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 SLC39A2Q9NP94 309 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 CRTAC1Q9NQ79 661 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 TLR8Q9NR97 1041 aaKnown RBP6.1□□□□□ -1.43
SSBP1-204ENST00000465167 ZNF446Q9NWS9 450 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 COMMD8Q9NX08 183 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 GCNT4Q9P109 453 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 MMP17Q9ULZ9 603 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 CTNND2Q9UQB3 1225 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 OTOGLQ3ZCN5 2332 aa6.1□□□□□ -1.43
SSBP1-204ENST00000465167 NUP205Q92621 2012 aa6.09□□□□□ -1.43
SSBP1-204ENST00000465167 PTPRJQ12913 1337 aa6.09□□□□□ -1.43
SSBP1-204ENST00000465167 A0A087WUV0 522 aaPredicted RBP6.09□□□□□ -1.43
SSBP1-204ENST00000465167 TCRBV21S2A2A0A5A6 115 aa6.09□□□□□ -1.43
SSBP1-204ENST00000465167 BCLAF3A2AJT9 711 aaKnown RBP6.09□□□□□ -1.43
SSBP1-204ENST00000465167 TBC1D3BA6NDS4 549 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms