RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 SPRTNQ9H040 489 aaPredicted RBP4.55□□□□□ -1.68
USP9X-204ENST00000463829 SLC32A1Q9H598 525 aa4.55□□□□□ -1.68
USP9X-204ENST00000463829 CXorf56Q9H5V9 222 aa4.55□□□□□ -1.68
USP9X-204ENST00000463829 VEZTQ9HBM0 779 aa4.55□□□□□ -1.68
USP9X-204ENST00000463829 FZD3Q9NPG1 666 aa4.55□□□□□ -1.68
USP9X-204ENST00000463829 SEMA4BQ9NPR2 832 aaPredicted RBP4.55□□□□□ -1.68
USP9X-204ENST00000463829 IL1RAPL1Q9NZN1 696 aa4.55□□□□□ -1.68
USP9X-204ENST00000463829 ZNF70Q9UC06 446 aaPredicted RBP4.55□□□□□ -1.68
USP9X-204ENST00000463829 PCDHA12Q9UN75 941 aa4.55□□□□□ -1.68
USP9X-204ENST00000463829 RAP2CQ9Y3L5 183 aa4.55□□□□□ -1.68
USP9X-204ENST00000463829 ARHGAP10A1A4S6 786 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 GAGE12JA6NER3 117 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
USP9X-204ENST00000463829 ABCD3P28288 659 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 TNFSF8P32971 234 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 GGT5P36269 586 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 BLKP51451 505 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 ARSFP54793 590 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 DDX10Q13206 875 aaKnown RBP4.54□□□□□ -1.68
USP9X-204ENST00000463829 PKP1Q13835 747 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 SLC4A8Q2Y0W8 1093 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 EDRF1Q3B7T1 1238 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 ASPHD1Q5U4P2 390 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 C17orf99Q6UX52 265 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 BHLHA9Q7RTU4 235 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 SERPINA11Q86U17 422 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 TRIM74Q86UV6 250 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 TRIM73Q86UV7 250 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 CAMK1DQ8IU85 385 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 MMP21Q8N119 569 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 LRRC57Q8N9N7 239 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 AGXT2Q9BYV1 514 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 B3GNT4Q9C0J1 378 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 TTYH1Q9H313 450 aaPredicted RBP4.54□□□□□ -1.68
USP9X-204ENST00000463829 PEMTQ9UBM1 199 aa4.54□□□□□ -1.68
USP9X-204ENST00000463829 PLEKHB1Q9UF11 243 aaPredicted RBP4.54□□□□□ -1.68
USP9X-204ENST00000463829 COL3A1P02461 1466 aaPredicted RBP4.54□□□□□ -1.68
USP9X-204ENST00000463829 A0A096LPK6 155 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 DDTLA6NHG4 134 aaPredicted RBP4.53□□□□□ -1.68
USP9X-204ENST00000463829 MDM4O15151 490 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 MOSPD3O75425 235 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 NDUFB8O95169 186 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 IFNA2P01563 188 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 KLKB1P03952 638 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 MYZAPP0CAP1 466 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 ATP1A3P13637 1013 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 RFC1P35251 1148 aaPredicted RBP4.53□□□□□ -1.68
USP9X-204ENST00000463829 CCT4P50991 539 aaKnown RBP4.53□□□□□ -1.68
USP9X-204ENST00000463829 CASP6P55212 293 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 EFNB1P98172 346 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 MPP1Q00013 466 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 ME3Q16798 604 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 PRICKLE4Q2TBC4 344 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 FAM69AQ5T7M9 428 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 NCAPH2Q6IBW4 605 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 C11orf87Q6NUJ2 197 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 TRAPPC11Q7Z392 1133 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 CHD1LQ86WJ1 897 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 GPSM1Q86YR5 675 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 KDM1BQ8NB78 822 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 ZMIZ2Q8NF64 920 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 RFFLQ8WZ73 363 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 MAP6D1Q9H9H5 199 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 POT1Q9NUX5 634 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 BABAM1Q9NWV8 329 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 IRAK4Q9NWZ3 460 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 ELOVL5Q9NYP7 299 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 TBC1D14Q9P2M4 693 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 SEL1LQ9UBV2 794 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 PCDHGB5Q9Y5G0 923 aa4.53□□□□□ -1.68
USP9X-204ENST00000463829 IGLV5-39A0A0G2JS06 123 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 TMEM272A0A1B0GTI8 110 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.52□□□□□ -1.69
USP9X-204ENST00000463829 PABPN1LA6NDY0 278 aaKnown RBP4.52□□□□□ -1.69
USP9X-204ENST00000463829 SOCS2O14508 198 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 HSPB6O14558 160 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 EPN2O95208 641 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 MBD4O95243 580 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 F9P00740 461 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 MMP3P08254 477 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 ENO3P13929 434 aaPredicted RBP4.52□□□□□ -1.69
USP9X-204ENST00000463829 COX7A2P14406 83 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 ARL1P40616 181 aaPredicted RBP4.52□□□□□ -1.69
USP9X-204ENST00000463829 GPR12P47775 334 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 ZNF81P51508 661 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 UFM1P61960 85 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 YWHAZP63104 245 aaKnown RBP4.52□□□□□ -1.69
USP9X-204ENST00000463829 CYP4A11Q02928 519 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 ZNF667Q5HYK9 610 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 Q5PR19 223 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 FAM83HQ6ZRV2 1179 aaPredicted RBP4.52□□□□□ -1.69
USP9X-204ENST00000463829 RRM2BQ7LG56 351 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 HORMAD2Q8N7B1 307 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 PLD5Q8N7P1 536 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 C11orf65Q8NCR3 313 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 ZNF548Q8NEK5 533 aaPredicted RBP4.52□□□□□ -1.69
USP9X-204ENST00000463829 OR4N2Q8NGD1 307 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 RASSF8Q8NHQ8 419 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 NFKBIDQ8NI38 313 aa4.52□□□□□ -1.69
USP9X-204ENST00000463829 BICD2Q8TD16 824 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms