RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 TFE3P19532 575 aaPredicted RBP23.71■■□□□ 1.39
SSNA1-203ENST00000463511 AKT2P31751 481 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 ACTN2P35609 894 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 E2F1Q01094 437 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 CCDC173Q0VFZ6 552 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 TBC1D25Q3MII6 688 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 NEK5Q6P3R8 708 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 LINGO4Q6UY18 593 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 TMC6Q7Z403 805 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 CHST14Q8NCH0 376 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 GRIN3AQ8TCU5 1115 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 TRIM5Q9C035 493 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 TKTL2Q9H0I9 626 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 PCDHB1Q9Y5F3 818 aa23.71■■□□□ 1.39
SSNA1-203ENST00000463511 COL27A1Q8IZC6 1860 aaPredicted RBP23.7■■□□□ 1.39
SSNA1-203ENST00000463511 PCDH8O95206 1070 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 CYP11B1P15538 503 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 HNRNPA2B1P22626 353 aaKnown RBP23.7■■□□□ 1.38
SSNA1-203ENST00000463511 CLDN2P57739 230 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 C19orf57Q0VDD7 668 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 SEL1L3Q68CR1 1132 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 TFAP2DQ7Z6R9 452 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 ERICH1Q86X53 443 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 SLC22A18ASQ8N1D0 253 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 TMIEQ8NEW7 156 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 ZNF397Q8NF99 534 aaPredicted RBP23.7■■□□□ 1.38
SSNA1-203ENST00000463511 NPY6RQ99463 290 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 TNKS2Q9H2K2 1166 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 WDCPQ9H6R7 721 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 ARHGEF38Q9NXL2 777 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 MYO6Q9UM54 1294 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 ZFR2Q9UPR6 939 aaKnown RBP23.7■■□□□ 1.38
SSNA1-203ENST00000463511 SETXQ7Z333 2677 aaKnown RBP23.7■■□□□ 1.38
SSNA1-203ENST00000463511 ATMQ13315 3056 aa23.7■■□□□ 1.38
SSNA1-203ENST00000463511 CHD5Q8TDI0 1954 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 A0A0D9SEW6 157 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 PIAS2O75928 621 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 ZIC2O95409 532 aaPredicted RBP23.69■■□□□ 1.38
SSNA1-203ENST00000463511 PRNPP04156 253 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 KRT9P35527 623 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 CXCR3P49682 368 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 SULT1E1P49888 294 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 SNX16P57768 344 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 RNASE9P60153 205 aaKnown RBP23.69■■□□□ 1.38
SSNA1-203ENST00000463511 CCDC15Q0P6D6 951 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 C22orf39Q6P5X5 142 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 GCNT7Q6ZNI0 430 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 VSTM4Q8IW00 320 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 ZNF683Q8IZ20 524 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 DCAF4L2Q8NA75 395 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 TMPRSS4Q9NRS4 437 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 MPP6Q9NZW5 540 aa23.69■■□□□ 1.38
SSNA1-203ENST00000463511 A0A1W2PQJ5 194 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 TK2O00142 265 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 ENDOD1O94919 500 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 GIMD1P0DJR0 217 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 MYF5P13349 255 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 TLE3Q04726 772 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 ARSIQ5FYB1 569 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 BRMS1LQ5PSV4 323 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 ERN2Q76MJ5 926 aaKnown RBP23.68■■□□□ 1.38
SSNA1-203ENST00000463511 PTAR1Q7Z6K3 402 aaPredicted RBP23.68■■□□□ 1.38
SSNA1-203ENST00000463511 SETD3Q86TU7 594 aaPredicted RBP23.68■■□□□ 1.38
SSNA1-203ENST00000463511 NOP9Q86U38 636 aaKnown RBP23.68■■□□□ 1.38
SSNA1-203ENST00000463511 SPACA3Q8IXA5 215 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 RRN3Q9NYV6 651 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.68■■□□□ 1.38
SSNA1-203ENST00000463511 IL36AQ9UHA7 158 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 STAP1Q9ULZ2 295 aa23.68■■□□□ 1.38
SSNA1-203ENST00000463511 FAM170AA1A519 330 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 LRRC53A6NM62 1247 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 CKMT1AP12532 417 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 CLCN6P51797 869 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 TMEM259Q4ZIN3 620 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 ZNF542PQ5EBM4 170 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 SPECC1LQ69YQ0 1117 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 LRRC31Q6UY01 552 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 IRF2BP2Q7Z5L9 587 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 ABI3BPQ7Z7G0 1075 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 OR7D4Q8NG98 312 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 EPS8L1Q8TE68 723 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 IQCDQ96DY2 449 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 APOLD1Q96LR9 279 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 DNAJC28Q9NX36 388 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 NOCTQ9UK39 431 aaKnown RBP23.67■■□□□ 1.38
SSNA1-203ENST00000463511 CAPN11Q9UMQ6 739 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.67■■□□□ 1.38
SSNA1-203ENST00000463511 CFAP46Q8IYW2 2715 aa23.67■■□□□ 1.38
SSNA1-203ENST00000463511 A6NNZ2 444 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 OPA1O60313 960 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 LEFTY1O75610 366 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 GYPCP04921 128 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 ALPPL2P10696 532 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 FERP16591 822 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 RECQLP46063 649 aaPredicted RBP23.66■■□□□ 1.38
SSNA1-203ENST00000463511 ZNF75DP51815 510 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 CXADRP78310 365 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 DEUP1Q05D60 604 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 DPY19L3Q6ZPD9 716 aa23.66■■□□□ 1.38
SSNA1-203ENST00000463511 GPR155Q7Z3F1 870 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms