RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 BNIP3LO60238 219 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 NDUFS2O75306 463 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 LEFTY1O75610 366 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 SEMA4FO95754 770 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 GKP32189 559 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 GJC1P36383 396 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 VAV2P52735 878 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 CNTN1Q12860 1018 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 PAFAH1B3Q15102 231 aaKnown RBP17.99■□□□□ 0.47
VPS52-214ENST00000463486 TAZQ16635 292 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 ARSIQ5FYB1 569 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 AGBL4Q5VU57 503 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 TMCO3Q6UWJ1 677 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 DSG4Q86SJ6 1040 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 SYT12Q8IV01 421 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 KCTD6Q8NC69 237 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 OR2AP1Q8NGE2 309 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 TM6SF2Q9BZW4 377 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 BTBD1Q9H0C5 482 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 VPS45Q9NRW7 570 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 HECAQ9UBI9 543 aaPredicted RBP17.99■□□□□ 0.47
VPS52-214ENST00000463486 IPO11Q9UI26 975 aaKnown RBP17.99■□□□□ 0.47
VPS52-214ENST00000463486 SLCO1B1Q9Y6L6 691 aa17.99■□□□□ 0.47
VPS52-214ENST00000463486 PATE3B3GLJ2 98 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 MAFKO60675 156 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 IGHV4-34P06331 123 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 NOP2P46087 812 aaKnown RBP17.98■□□□□ 0.47
VPS52-214ENST00000463486 TAS2R38P59533 333 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 IL10RBQ08334 325 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 SF3A2Q15428 464 aaKnown RBP17.98■□□□□ 0.47
VPS52-214ENST00000463486 MYLK3Q32MK0 819 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 POM121L1PQ3SYA9 428 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 ATXN7L2Q5T6C5 722 aaPredicted RBP17.98■□□□□ 0.47
VPS52-214ENST00000463486 PIP5KL1Q5T9C9 394 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 FAM46CQ5VWP2 391 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 NCBP2-AS2Q69YL0 99 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 TCEAL6Q6IPX3 200 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 C11orf63Q6NUN7 778 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.98■□□□□ 0.47
VPS52-214ENST00000463486 CYP2U1Q7Z449 544 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 VSIG1Q86XK7 387 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 KIAA2013Q8IYS2 634 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 OR6K2Q8NGY2 324 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 PIGKQ92643 395 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 FOXJ1Q92949 421 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 TCEAL3Q969E4 200 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 CCDC114Q96M63 670 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 RNF157Q96PX1 679 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 OMDQ99983 421 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 HINFPQ9BQA5 517 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 HEPHQ9BQS7 1158 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 DESI2Q9BSY9 194 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 CALN1Q9BXU9 219 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 GRPEL1Q9HAV7 217 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 LUC7LQ9NQ29 371 aaKnown RBP17.98■□□□□ 0.47
VPS52-214ENST00000463486 RXFP3Q9NSD7 469 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 UBA2Q9UBT2 640 aaPredicted RBP17.98■□□□□ 0.47
VPS52-214ENST00000463486 IL36AQ9UHA7 158 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 NCKAP1Q9Y2A7 1128 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.98■□□□□ 0.47
VPS52-214ENST00000463486 CACNA1EQ15878 2313 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 RALGAPA1Q6GYQ0 2036 aa17.98■□□□□ 0.47
VPS52-214ENST00000463486 ZNF487B1APH4 448 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 DFFAO00273 331 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 MUSKO15146 869 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 PRNPP04156 253 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 MAOBP27338 520 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 RGRP47804 291 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 DNA2P51530 1060 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 ADPRHP54922 357 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 GSDMDP57764 484 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 SFSWAPQ12872 951 aaKnown RBP17.97■□□□□ 0.47
VPS52-214ENST00000463486 SLC10A2Q12908 348 aaPredicted RBP17.97■□□□□ 0.47
VPS52-214ENST00000463486 DCAF12L1Q5VU92 463 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 ZNF354CQ86Y25 554 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 MAP7D3Q8IWC1 876 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 RHOT1Q8IXI2 618 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 GPR161Q8N6U8 529 aaKnown RBP17.97■□□□□ 0.47
VPS52-214ENST00000463486 LRRC57Q8N9N7 239 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 GRIN3AQ8TCU5 1115 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 BIRC7Q96CA5 298 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 NSMCE3Q96MG7 304 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 HDAC8Q9BY41 377 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 EBF2Q9HAK2 575 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 FARP1Q9Y4F1 1045 aaPredicted RBP17.97■□□□□ 0.47
VPS52-214ENST00000463486 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.97■□□□□ 0.47
VPS52-214ENST00000463486 ATXN2Q99700 1313 aaKnown RBP17.97■□□□□ 0.47
VPS52-214ENST00000463486 KNL1Q8NG31 2342 aa17.97■□□□□ 0.47
VPS52-214ENST00000463486 PI4KAP42356 2102 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 C1QTNF3-AMACRE9PGA6 284 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 KPNA3O00505 521 aaPredicted RBP17.96■□□□□ 0.47
VPS52-214ENST00000463486 INSIG1O15503 277 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 SLC7A4O43246 635 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 PLRG1O43660 514 aaKnown RBP17.96■□□□□ 0.47
VPS52-214ENST00000463486 MFSD11O43934 449 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 POP4O95707 220 aaKnown RBP17.96■□□□□ 0.47
VPS52-214ENST00000463486 HOXD12P35452 270 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 RECQLP46063 649 aaPredicted RBP17.96■□□□□ 0.47
VPS52-214ENST00000463486 MARCKSL1P49006 195 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 SNRPD1P62314 119 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms