RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 NIPAL4Q0D2K0 466 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 ENPP2Q13822 863 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 PPP1R7Q15435 360 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 ERCC6LQ2NKX8 1250 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 FSTL4Q6MZW2 842 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 METTL3Q86U44 580 aaKnown RBP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 RNF135Q8IUD6 432 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 PLPP6Q8IY26 295 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 ZNF687Q8N1G0 1237 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 CCHCR1Q8TD31 782 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 CYB5D2Q8WUJ1 264 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 NSMCE1Q8WV22 266 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 MSANTD3Q96H12 275 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 CEP44Q9C0F1 390 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 SLC25A51Q9H1U9 297 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 GBA3Q9H227 469 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 EPC1Q9H2F5 836 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 ETNK1Q9HBU6 452 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 NT5MQ9NPB1 228 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 CD320Q9NPF0 282 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 GDF3Q9NR23 364 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 GRHL1Q9NZI5 618 aa14.58□□□□□ -0.08
COL6A1-202ENST00000463060 KLHL8Q9P2G9 620 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-202ENST00000463060 MUC22E2RYF6 1773 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 RHOXF2BP0C7M4 288 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 NFKB1P19838 968 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 HSPA9P38646 679 aaKnown RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 CSNK1DP48730 415 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 GPS1Q13098 491 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 SEMA5AQ13591 1074 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 NAA30Q147X3 362 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 KCTD11Q693B1 232 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 PRPF39Q86UA1 669 aaKnown RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 ATP11CQ8NB49 1132 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 MYRIPQ8NFW9 859 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 UBXN4Q92575 508 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 IMP4Q96G21 291 aaKnown RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 OXNAD1Q96HP4 312 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 HINFPQ9BQA5 517 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 RHOXF2Q9BQY4 288 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 CIPCQ9C0C6 399 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 RAB17Q9H0T7 212 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 TMEM245Q9H330 911 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 EPB41L5Q9HCM4 733 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 WHRNQ9P202 907 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 THAP10Q9P2Z0 257 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 WNT16Q9UBV4 365 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 SLC25A13Q9UJS0 675 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 FCF1Q9Y324 198 aaKnown RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 SNX24Q9Y343 169 aa14.57□□□□□ -0.08
COL6A1-202ENST00000463060 UTP11Q9Y3A2 253 aaKnown RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 FARP1Q9Y4F1 1045 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-202ENST00000463060 TCF20Q9UGU0 1960 aaKnown RBP14.56□□□□□ -0.08
COL6A1-202ENST00000463060 DNALI1O14645 258 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-202ENST00000463060 SEC31AO94979 1220 aaKnown RBP14.56□□□□□ -0.08
COL6A1-202ENST00000463060 PSMB4P28070 264 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 FDFT1P37268 417 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 ADCY8P40145 1251 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 VPS41P49754 854 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 MAXP61244 160 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 GUCY2DQ02846 1103 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 ZNF235Q14590 738 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 KCNJ11Q14654 390 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 DLG2Q15700 870 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 RNASEH2BQ5TBB1 312 aaKnown RBP14.56□□□□□ -0.08
COL6A1-202ENST00000463060 EMC10Q5UCC4 262 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 ITPRIPL1Q6GPH6 555 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 ZDHHC24Q6UX98 284 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 ARHGEF18Q6ZSZ5 1173 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 PCDH20Q8N6Y1 951 aaKnown RBP14.56□□□□□ -0.08
COL6A1-202ENST00000463060 CPT1BQ92523 772 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 LRRC45Q96CN5 670 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 NUDCD1Q96RS6 583 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 MLPHQ9BV36 600 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-202ENST00000463060 POLR1EQ9GZS1 481 aaKnown RBP14.56□□□□□ -0.08
COL6A1-202ENST00000463060 RAB6BQ9NRW1 208 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.56□□□□□ -0.08
COL6A1-202ENST00000463060 ASIC3Q9UHC3 531 aa14.56□□□□□ -0.08
COL6A1-202ENST00000463060 V9GYY5 206 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-202ENST00000463060 TCRBV7S3A2A0A539 114 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 TTC24A2A3L6 582 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-202ENST00000463060 TTC34A8MYJ7 566 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 GJB3O75712 270 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 GSRP00390 522 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 ITIH2P19823 946 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 DRD1P21728 446 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 CES1P23141 567 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 ACTN2P35609 894 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 SKOR1P84550 965 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 DSC2Q02487 901 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 PRKCQQ04759 706 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 CBLBQ13191 982 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 ZNF234Q14588 700 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 PON2Q15165 354 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 MLF2Q15773 248 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-202ENST00000463060 SLC14A2Q15849 920 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 RALGPS1Q5JS13 557 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 FAXCQ5TGI0 409 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 CCDC70Q6NSX1 233 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms