RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 CHST14Q8NCH0 376 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ARHGEF2Q92974 986 aaKnown RBP7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ARRDC3Q96B67 414 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 TBC1D31Q96DN5 1066 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 KLHDC7BQ96G42 594 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 PPP1R16AQ96I34 528 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 LRIG1Q96JA1 1093 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 FEM1CQ96JP0 617 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 CNPY3Q9BT09 278 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 EDEM3Q9BZQ6 932 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 RAB6CQ9H0N0 254 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 AIPL1Q9NZN9 384 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 DNAI1Q9UI46 699 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 KLK13Q9UKR3 277 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 BTBD3Q9Y2F9 522 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 HS3ST3A1Q9Y663 406 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 ASXL3Q9C0F0 2248 aa7.43□□□□□ -1.22
PTPRF-210ENST00000463041 WDFY3Q8IZQ1 3526 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 FREM2Q5SZK8 3169 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 A0A1W2PQC6 194 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 A0A1W2PQU0 124 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 WASH4PA8MWX3 477 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 FAM72CH0Y354 149 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 SLC31A1O15431 190 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 AP1G1O43747 822 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 RAMP2O60895 175 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 LEFTY1O75610 366 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 PCDH8O95206 1070 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 GJB6O95452 261 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 LDOC1O95751 146 aaPredicted RBP7.42□□□□□ -1.22
PTPRF-210ENST00000463041 CD160O95971 181 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 ATXN1LP0C7T5 689 aaKnown RBP7.42□□□□□ -1.22
PTPRF-210ENST00000463041 ITGB7P26010 798 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 EPHB2P29323 1055 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 MAT2AP31153 395 aaKnown RBP7.42□□□□□ -1.22
PTPRF-210ENST00000463041 AKT2P31751 481 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 HTR7P34969 479 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 ACVRL1P37023 503 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 ZNF165P49910 485 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 SNRPD1P62314 119 aaKnown RBP7.42□□□□□ -1.22
PTPRF-210ENST00000463041 RPL7AP62424 266 aaKnown RBP7.42□□□□□ -1.22
PTPRF-210ENST00000463041 PPP2CBP62714 309 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 RPS21P63220 83 aaKnown RBP7.42□□□□□ -1.22
PTPRF-210ENST00000463041 PPP2CAP67775 309 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 ARF5P84085 180 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 RAD51Q06609 339 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 NR1I3Q14994 352 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 SHBQ15464 509 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 ZNF284Q2VY69 593 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 MYLK3Q32MK0 819 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 POM121L1PQ3SYA9 428 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 INO80DQ53TQ3 878 aaPredicted RBP7.42□□□□□ -1.22
PTPRF-210ENST00000463041 EFHC2Q5JST6 749 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 PPP1R15BQ5SWA1 713 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 PRAMEF14Q5SWL7 426 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 FAM72AQ5TYM5 149 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 FAM72DQ6L9T8 149 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 SCYL2Q6P3W7 929 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 FBXL19Q6PCT2 694 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 TMPRSS7Q7RTY8 843 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 HORMAD1Q86X24 394 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 FAM72BQ86X60 149 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 SPATS2Q86XZ4 545 aaKnown RBP7.42□□□□□ -1.22
PTPRF-210ENST00000463041 GALNT15Q8N3T1 639 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 CCDC185Q8N715 623 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 SAP25Q8TEE9 199 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 CASKIN2Q8WXE0 1202 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 BAP1Q92560 729 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 RAB7BQ96AH8 199 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 NCAPGQ9BPX3 1015 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 MAGEB5Q9BZ81 275 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 TNKS2Q9H2K2 1166 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 CATSPERBQ9H7T0 1116 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 NDFIP2Q9NV92 336 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 PARVAQ9NVD7 372 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 TOR4AQ9NXH8 423 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 HECAQ9UBI9 543 aaPredicted RBP7.42□□□□□ -1.22
PTPRF-210ENST00000463041 ZMIZ1Q9ULJ6 1067 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 FZD10Q9ULW2 581 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 PCDHGA1Q9Y5H4 931 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 WASF2Q9Y6W5 498 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 FAM208BQ5VWN6 2430 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 MYLKQ15746 1914 aa7.42□□□□□ -1.22
PTPRF-210ENST00000463041 APC2O95996 2303 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 COL5A1P20908 1838 aaPredicted RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 A0A1B0GTH6 734 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 EIF3CLB5ME19 914 aaKnown RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 CCP110O43303 1012 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 TSPAN6O43657 245 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 BUB1O43683 1085 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 GSRP00390 522 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 CAPNS1P04632 268 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 ADRB3P13945 408 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 HNRNPA2B1P22626 353 aaKnown RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 PRKCIP41743 596 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 CCNHP51946 323 aaPredicted RBP7.41□□□□□ -1.22
PTPRF-210ENST00000463041 NEK3P51956 506 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 IL9RQ01113 521 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 BNIP3Q12983 259 aa7.41□□□□□ -1.22
PTPRF-210ENST00000463041 MAMLD1Q13495 774 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms