RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 UCHL3P15374 230 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 ITPKBP27987 946 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 SDC4P31431 198 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 RABIFP47224 123 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 ATP11AP98196 1134 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 TMEM259Q4ZIN3 620 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 KYAT3Q6YP21 454 aaKnown RBP15.68■□□□□ 0.1
SKA3-204ENST00000462482 GCNT7Q6ZNI0 430 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 ARCQ7LC44 396 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 LSMEM2Q8N112 164 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 RAB7BQ96AH8 199 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 ARHGEF26Q96DR7 871 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 CRELD1Q96HD1 420 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 CLSTN2Q9H4D0 955 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 HECAQ9UBI9 543 aaPredicted RBP15.68■□□□□ 0.1
SKA3-204ENST00000462482 ZFR2Q9UPR6 939 aaKnown RBP15.68■□□□□ 0.1
SKA3-204ENST00000462482 FCF1Q9Y324 198 aaKnown RBP15.68■□□□□ 0.1
SKA3-204ENST00000462482 FADS3Q9Y5Q0 445 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 WASF2Q9Y6W5 498 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 PLXNB3Q9ULL4 1909 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 ITPR1Q14643 2758 aa15.68■□□□□ 0.1
SKA3-204ENST00000462482 ADAMTS20P59510 1910 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 CXorf51AA0A1B0GTR3 108 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 RIOK3O14730 519 aaKnown RBP15.67■□□□□ 0.1
SKA3-204ENST00000462482 SCAMP1O15126 338 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 TSPAN6O43657 245 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 OPA1O60313 960 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 ZMPSTE24O75844 475 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 PAK4O96013 591 aaPredicted RBP15.67■□□□□ 0.1
SKA3-204ENST00000462482 GP1BAP07359 652 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 EEF1GP26641 437 aaKnown RBP15.67■□□□□ 0.1
SKA3-204ENST00000462482 MAPKAPK2P49137 400 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 SNRPD1P62314 119 aaKnown RBP15.67■□□□□ 0.1
SKA3-204ENST00000462482 CDO1Q16878 200 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 C2CD6Q53TS8 623 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 MIIPQ5JXC2 388 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 NOP9Q86U38 636 aaKnown RBP15.67■□□□□ 0.1
SKA3-204ENST00000462482 PARGQ86W56 976 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 ZNF354CQ86Y25 554 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 ISG20Q96AZ6 181 aaKnown RBP15.67■□□□□ 0.1
SKA3-204ENST00000462482 APOLD1Q96LR9 279 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 FCRL3Q96P31 734 aaPredicted RBP15.67■□□□□ 0.1
SKA3-204ENST00000462482 LGMNQ99538 433 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 TM6SF2Q9BZW4 377 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 METTL5Q9NRN9 209 aaKnown RBP15.67■□□□□ 0.1
SKA3-204ENST00000462482 OR12D3Q9UGF7 316 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 TMEM59LQ9UK28 342 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 ACACAQ13085 2346 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 PLXNA2O75051 1894 aa15.67■□□□□ 0.1
SKA3-204ENST00000462482 BAHCC1Q9P281 2608 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 F8VZ95 297 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 MMEP08473 750 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 RHOQP17081 205 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 ADRA1BP35368 520 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 NOMO3P69849 1222 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 RAD51Q06609 339 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 C19orf57Q0VDD7 668 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 CCDC173Q0VFZ6 552 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 TBC1D25Q3MII6 688 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 DPCR1Q3MIW9 517 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 ZNF542PQ5EBM4 170 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 CT47A1Q5JQC4 288 aaPredicted RBP15.66■□□□□ 0.1
SKA3-204ENST00000462482 BROXQ5VW32 411 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 ZCCHC8Q6NZY4 707 aaKnown RBP15.66■□□□□ 0.1
SKA3-204ENST00000462482 PLPP6Q8IY26 295 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 SLC22A18ASQ8N1D0 253 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 EMC1Q8N766 993 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 FAM181AQ8N9Y4 354 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 ZNF248Q8NDW4 579 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 MAPK15Q8TD08 544 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 EPS8L1Q8TE68 723 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 BBC3Q96PG8 261 aaPredicted RBP15.66■□□□□ 0.1
SKA3-204ENST00000462482 OSBPL1AQ9BXW6 950 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 NUP62CLQ9H1M0 184 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 MAGEH1Q9H213 219 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 PTPRBP23467 1997 aa15.66■□□□□ 0.1
SKA3-204ENST00000462482 TMEM131Q92545 1883 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 SPTY2D1-AS1A0A0U1RR47 76 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 C16orf96A6NNT2 1141 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 K7ESM1 405 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 TK2O00142 265 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 KRIT1O00522 736 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 RAMP2O60895 175 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 ZNF821O75541 412 aaPredicted RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 POP4O95707 220 aaKnown RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 GSRP00390 522 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 CSF2P04141 144 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 THOP1P52888 689 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 PCBP4P57723 403 aaKnown RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 ARF5P84085 180 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 NRG1Q02297 640 aaPredicted RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 PDE1CQ14123 709 aaPredicted RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 PTK2BQ14289 1009 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 ZNF805Q5CZA5 627 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 TCP11X2Q5H9J9 407 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 FKBP15Q5T1M5 1219 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 TRIM72Q6ZMU5 477 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 PARS2Q7L3T8 475 aaKnown RBP15.65■□□□□ 0.1
SKA3-204ENST00000462482 GPR155Q7Z3F1 870 aa15.65■□□□□ 0.1
SKA3-204ENST00000462482 DENND6BQ8NEG7 585 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms