RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 MAGEC1O60732 1142 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 RAMP2O60895 175 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 ITGAVP06756 1048 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 L1CAMP32004 1257 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 ARRB1P49407 418 aaPredicted RBP19.31■□□□□ 0.68
VARS-220ENST00000461874 CCNI2Q6ZMN8 369 aaPredicted RBP19.31■□□□□ 0.68
VARS-220ENST00000461874 HORMAD1Q86X24 394 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 PLPP6Q8IY26 295 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 PYROXD2Q8N2H3 581 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 ISG20Q96AZ6 181 aaKnown RBP19.31■□□□□ 0.68
VARS-220ENST00000461874 PPP1R16AQ96I34 528 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 CNPY3Q9BT09 278 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 TAS2R14Q9NYV8 317 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 GOLGA8CPA6NN73 597 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 SLC31A1O15431 190 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 TNFAIP3P21580 790 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 ITGB7P26010 798 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 EPHA8P29322 1005 aaPredicted RBP19.3■□□□□ 0.68
VARS-220ENST00000461874 CCNHP51946 323 aaPredicted RBP19.3■□□□□ 0.68
VARS-220ENST00000461874 GEMIN4P57678 1058 aaKnown RBP19.3■□□□□ 0.68
VARS-220ENST00000461874 ZNF284Q2VY69 593 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 EFHC2Q5JST6 749 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 CAVIN1Q6NZI2 390 aaKnown RBP19.3■□□□□ 0.68
VARS-220ENST00000461874 SCYL2Q6P3W7 929 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 OXR1Q8N573 874 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 TMEM145Q8NBT3 493 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 ZCCHC14Q8WYQ9 949 aaKnown RBP19.3■□□□□ 0.68
VARS-220ENST00000461874 KLK6Q92876 244 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 VCPIP1Q96JH7 1222 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 HECAQ9UBI9 543 aaPredicted RBP19.3■□□□□ 0.68
VARS-220ENST00000461874 FTSJ1Q9UET6 329 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 HPCAL4Q9UM19 191 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 CA5BQ9Y2D0 317 aa19.3■□□□□ 0.68
VARS-220ENST00000461874 CFAP47Q6ZTR5 3102 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 PCDH8O95206 1070 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 PRLRP16471 622 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 EPHB2P29323 1055 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 ZNF165P49910 485 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 NEK3P51956 506 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 POLD3Q15054 466 aaPredicted RBP19.29■□□□□ 0.68
VARS-220ENST00000461874 FILIP1LQ4L180 1135 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 PPP1R2P3Q6NXS1 205 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 DCUN1D2Q6PH85 259 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 TMPRSS7Q7RTY8 843 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 RTL3Q8N8U3 475 aaKnown RBP19.29■□□□□ 0.68
VARS-220ENST00000461874 KLHDC7BQ96G42 594 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 TM6SF2Q9BZW4 377 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 NOL6Q9H6R4 1146 aaKnown RBP19.29■□□□□ 0.68
VARS-220ENST00000461874 FZD10Q9ULW2 581 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 ZFR2Q9UPR6 939 aaKnown RBP19.29■□□□□ 0.68
VARS-220ENST00000461874 ZZEF1O43149 2961 aa19.29■□□□□ 0.68
VARS-220ENST00000461874 A0A1W2PQC6 194 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 LRRC53A6NM62 1247 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 KDELR3O43731 214 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 ADRB3P13945 408 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 AIF1P55008 147 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 OGDHQ02218 1023 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 BNIP3Q12983 259 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 MAMLD1Q13495 774 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 TMEM259Q4ZIN3 620 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 ZDHHC6Q9H6R6 413 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 CHD6Q8TD26 2715 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 ZFHX4Q86UP3 3567 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 DOCK9Q9BZ29 2069 aa19.28■□□□□ 0.68
VARS-220ENST00000461874 WDFY3Q8IZQ1 3526 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 A0A1B0GTH6 734 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 ZSCAN5CA6NGD5 496 aaPredicted RBP19.27■□□□□ 0.68
VARS-220ENST00000461874 LDOC1O95751 146 aaPredicted RBP19.27■□□□□ 0.68
VARS-220ENST00000461874 GSRP00390 522 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 CAPNS1P04632 268 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 HNRNPA2B1P22626 353 aaKnown RBP19.27■□□□□ 0.68
VARS-220ENST00000461874 AKT2P31751 481 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 IQCB1Q15051 598 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 ASIC2Q16515 512 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 SFMBT2Q5VUG0 894 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 SEL1L3Q68CR1 1132 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 FBXL19Q6PCT2 694 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 LEKR1Q6ZMV7 388 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 PARS2Q7L3T8 475 aaKnown RBP19.27■□□□□ 0.68
VARS-220ENST00000461874 KANSL1Q7Z3B3 1105 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 TMC6Q7Z403 805 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 RYBPQ8N488 228 aaPredicted RBP19.27■□□□□ 0.68
VARS-220ENST00000461874 EID2Q8N6I1 236 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 OR6K2Q8NGY2 324 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 VOPP1Q96AW1 172 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 LRIG1Q96JA1 1093 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 NAP1L5Q96NT1 182 aaPredicted RBP19.27■□□□□ 0.68
VARS-220ENST00000461874 EPAS1Q99814 870 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 MYOCQ99972 504 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 FUCA2Q9BTY2 467 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 FZD3Q9NPG1 666 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 PARVAQ9NVD7 372 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 AIPL1Q9NZN9 384 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 FADS3Q9Y5Q0 445 aa19.27■□□□□ 0.68
VARS-220ENST00000461874 CHD5Q8TDI0 1954 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 WASH4PA8MWX3 477 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 TMCO5BA8MYB1 307 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 ENC1O14682 589 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 BUB1O43683 1085 aa19.26■□□□□ 0.67
VARS-220ENST00000461874 AP1G1O43747 822 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms