RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 RNF103O00237 685 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 KPNA3O00505 521 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 BNIP3LO60238 219 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 LRIG2O94898 1065 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 GJB6O95452 261 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 PLEKP08567 350 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 C1SP09871 688 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 CDK4P11802 303 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 FERP16591 822 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 GPD1P21695 349 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 EPHA8P29322 1005 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 L1CAMP32004 1257 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 ACVRL1P37023 503 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 RECQLP46063 649 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 ARRB1P49407 418 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 ZNF143P52747 638 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 GEMIN4P57678 1058 aaKnown RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 TYRO3Q06418 890 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 ZNF284Q2VY69 593 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 PPP1R15BQ5SWA1 713 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 SFMBT2Q5VUG0 894 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 ACAD10Q6JQN1 1059 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 PPP1R2P3Q6NXS1 205 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 ERN2Q76MJ5 926 aaKnown RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 KANSL1Q7Z3B3 1105 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 PHLDB2Q86SQ0 1253 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 ZSCAN30Q86W11 494 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 HORMAD1Q86X24 394 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 DRC7Q8IY82 874 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 FAM174AQ8TBP5 190 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 FAM172AQ8WUF8 416 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 TSC1Q92574 1164 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 ARHGEF2Q92974 986 aaKnown RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 VOPP1Q96AW1 172 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 PPP1R16AQ96I34 528 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 LRIG1Q96JA1 1093 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 VCPIP1Q96JH7 1222 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 HEPHQ9BQS7 1158 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 SELENOOQ9BVL4 669 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 MAGEB5Q9BZ81 275 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 NAT10Q9H0A0 1025 aaKnown RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 TNKS2Q9H2K2 1166 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 ATP13A1Q9HD20 1204 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 RTN4Q9NQC3 1192 aaKnown RBP9.34□□□□□ -0.91
BRCA1-207ENST00000461798 NDFIP2Q9NV92 336 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 IL36AQ9UHA7 158 aa9.34□□□□□ -0.91
BRCA1-207ENST00000461798 A0A1W2PQU0 124 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 ZSCAN5CA6NGD5 496 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-207ENST00000461798 SRRM3A6NNA2 597 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-207ENST00000461798 WASH4PA8MWX3 477 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 TAF4O00268 1085 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 KDELR3O43731 214 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 AP1G1O43747 822 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 LEFTY1O75610 366 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 ITGAVP06756 1048 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 ATP1A3P13637 1013 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 ITGB7P26010 798 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 MAT2AP31153 395 aaKnown RBP9.33□□□□□ -0.92
BRCA1-207ENST00000461798 AIF1P55008 147 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 IL9RQ01113 521 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 SMAD1Q15797 465 aaKnown RBP9.33□□□□□ -0.92
BRCA1-207ENST00000461798 CDO1Q16878 200 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 POM121L1PQ3SYA9 428 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 TMEM259Q4ZIN3 620 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 RWDD4Q6NW29 188 aaKnown RBP9.33□□□□□ -0.92
BRCA1-207ENST00000461798 SLFN11Q7Z7L1 901 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 GATAD2AQ86YP4 633 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 MCOLN2Q8IZK6 566 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 GALNT15Q8N3T1 639 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 CCDC185Q8N715 623 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 CASKIN2Q8WXE0 1202 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 ASB12Q8WXK4 309 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 ZCCHC14Q8WYQ9 949 aaKnown RBP9.33□□□□□ -0.92
BRCA1-207ENST00000461798 BAP1Q92560 729 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 TBC1D31Q96DN5 1066 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 KLHDC7BQ96G42 594 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 CNPY3Q9BT09 278 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 DYRK4Q9NR20 520 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 KLHL11Q9NVR0 708 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 TMEM63CQ9P1W3 806 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 DKK4Q9UBT3 224 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 FTSJ1Q9UET6 329 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 FADS3Q9Y5Q0 445 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 HS3ST3A1Q9Y663 406 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 CHD6Q8TD26 2715 aa9.33□□□□□ -0.92
BRCA1-207ENST00000461798 AKAP13Q12802 2813 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 FRYQ5TBA9 3013 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 A0A1W2PQC6 194 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 ANKRD62A6NC57 917 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 SMTNL1A8MU46 457 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 ENC1O14682 589 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 SLC31A1O15431 190 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 TEX33O43247 280 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 RAMP2O60895 175 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 POP4O95707 220 aaKnown RBP9.32□□□□□ -0.92
BRCA1-207ENST00000461798 LDOC1O95751 146 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-207ENST00000461798 GSRP00390 522 aa9.32□□□□□ -0.92
BRCA1-207ENST00000461798 HNRNPA2B1P22626 353 aaKnown RBP9.32□□□□□ -0.92
BRCA1-207ENST00000461798 HTR7P34969 479 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms