RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RSRC1Q96IZ7 334 aaKnown RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 FRG2BQ96QU4 278 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 HEMGNQ9BXL5 484 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 NUF2Q9BZD4 464 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 MUC13Q9H3R2 512 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 SMARCAD1Q9H4L7 1026 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 CXorf56Q9H5V9 222 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 SH2D4AQ9H788 454 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 PRKRIP1Q9H875 184 aaPredicted RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 ACTR5Q9H9F9 607 aaPredicted RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 CLIC5Q9NZA1 410 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 KIAA1456Q9P272 454 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 NLKQ9UBE8 527 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 CTNNAL1Q9UBT7 734 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 SERGEFQ9UGK8 458 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 FBXO40Q9UH90 709 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 NRBP1Q9UHY1 535 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 ZNF215Q9UL58 517 aaPredicted RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 CORO1CQ9ULV4 474 aaPredicted RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 TTLL3Q9Y4R7 772 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 RSF1Q96T23 1441 aaPredicted RBP3.36□□□□□ -1.87
VCL-203ENST00000461383 RUSC2Q8N2Y8 1516 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 C17orf100A8MU93 164 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 MYO1GB0I1T2 1018 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 RHODO00212 210 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 SLC25A17O43808 307 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 AHCYL1O43865 530 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 UGDHO60701 494 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 DDAH2O95865 285 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 KRT10P13645 584 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 ZNF8P17098 575 aaPredicted RBP3.36□□□□□ -1.87
VCL-203ENST00000461383 YWHAQP27348 245 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 MAPK4P31152 587 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 HOXA7P31268 230 aaPredicted RBP3.36□□□□□ -1.87
VCL-203ENST00000461383 TTKP33981 857 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 ACTN2P35609 894 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 RAD52P43351 418 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 GNAQP50148 359 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 CLCNKBP51801 687 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 ARSFP54793 590 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 HSF1Q00613 529 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 MC1RQ01726 317 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 CYP4A11Q02928 519 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 KRTAP1-1Q07627 177 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 STIM1Q13586 685 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 SEMA3AQ14563 771 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 CRYMQ14894 314 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 ME3Q16798 604 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 DPCR1Q3MIW9 517 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 PLK5Q496M5 336 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 VWA5B1Q5TIE3 1220 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 ATG9BQ674R7 924 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 FCRLBQ6BAA4 426 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 MIS18BP1Q6P0N0 1132 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 TMEM154Q6P9G4 183 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 CPLX2Q6PUV4 134 aaKnown RBP3.36□□□□□ -1.87
VCL-203ENST00000461383 OLFML1Q6UWY5 402 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 C17orf99Q6UX52 265 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 ZNF813Q6ZN06 617 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 KRBA2Q6ZNG9 492 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 WDR5BQ86VZ2 330 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 LURAP1LQ8IV03 231 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 TAGAPQ8N103 731 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 OR8H2Q8N162 312 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 SRBD1Q8N5C6 995 aaKnown RBP3.36□□□□□ -1.87
VCL-203ENST00000461383 EXD3Q8N9H8 876 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 CALML4Q96GE6 196 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 BBS4Q96RK4 519 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 H2AFJQ9BTM1 129 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 SCNM1Q9BWG6 230 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 MAK16Q9BXY0 300 aaKnown RBP3.36□□□□□ -1.87
VCL-203ENST00000461383 HIPK3Q9H422 1215 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 KAT14Q9H8E8 782 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 ATP8A2Q9NTI2 1148 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 GRHL1Q9NZI5 618 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 CDH22Q9UJ99 828 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 MKLN1Q9UL63 735 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 TMEM5Q9Y2B1 443 aa3.36□□□□□ -1.87
VCL-203ENST00000461383 FAM237BA0A1B0GVD1 139 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 hCG_1807616A0A1W2PRN6 198 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 TYW5A2RUC4 315 aaKnown RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 LIPT2A6NK58 231 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 LDLRAD4O15165 306 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 VILLO15195 856 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 TMCC1O94876 653 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 EIF2S1P05198 315 aaKnown RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 LCKP06239 509 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 PCNAP12004 261 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 KRT4P19013 534 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 ICAM3P32942 547 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 HOXD13P35453 343 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 PBX3P40426 434 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 NLRP5P59047 1200 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 PRAMEP78395 509 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 CREB5Q02930 508 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 FRG1Q14331 258 aaKnown RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 RPE65Q16518 533 aa3.35□□□□□ -1.87
VCL-203ENST00000461383 HIST2H2ACQ16777 129 aaPredicted RBP3.35□□□□□ -1.87
VCL-203ENST00000461383 PROSER3Q2NL68 480 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms