RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 RNF169Q8NCN4 708 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 IL17RDQ8NFM7 739 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 DBF4BQ8NFT6 615 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 CAGE1Q8TC20 777 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 POMGNT1Q8WZA1 660 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 BADQ92934 168 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 P2RX5Q93086 422 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 NMD3Q96D46 503 aaKnown RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 MBD6Q96DN6 1003 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 THOC1Q96FV9 657 aaKnown RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 C1orf74Q96LT6 269 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 PWWP2AQ96N64 755 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 SPAG5Q96R06 1193 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 NTPCRQ9BSD7 190 aaKnown RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 CENPOQ9BU64 300 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 TRIM54Q9BYV2 358 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 IFIH1Q9BYX4 1025 aaKnown RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 TRIM7Q9C029 511 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 C2orf40Q9H1Z8 148 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 HSD3B7Q9H2F3 369 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 FZD8Q9H461 694 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 LDAHQ9H6V9 325 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 PPCSQ9HAB8 311 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 C17orf75Q9HAS0 396 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 MSL2Q9HCI7 577 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 PNPLA8Q9NP80 782 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 AGPAT5Q9NUQ2 364 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 PRMT7Q9NVM4 692 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 ANO10Q9NW15 660 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 C6orf203Q9P0P8 240 aaPredicted RBP5.23□□□□□ -1.57
SF3A3-202ENST00000460925 SPATA7Q9P0W8 599 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 RSPH14Q9UHP6 348 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 CORO2BQ9UQ03 480 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 MED16Q9Y2X0 877 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 NFE2L3Q9Y4A8 694 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 SNX13Q9Y5W8 968 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 ATG2AQ2TAZ0 1938 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 UBE4BO95155 1302 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 PTPRJQ12913 1337 aa5.23□□□□□ -1.57
SF3A3-202ENST00000460925 CHD7Q9P2D1 2997 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 PDE4DIPQ5VU43 2346 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 A0A0B4J203 849 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 F5H423 210 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 ETV2O00321 342 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 ACKR2O00590 384 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 PSMA7O14818 248 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 KIAA0355O15063 1070 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 ASAP2O43150 1006 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 AP5Z1O43299 807 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 FAM189A1O60320 539 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 MTRF1O75570 445 aaKnown RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 AKAP3O75969 853 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 RECQL4O94761 1208 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 TIMP1P01033 207 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 PIGRP01833 764 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 NR3C1P04150 777 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 TRIM49P0CI25 452 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 TRIM49CP0CI26 452 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 CXCL8P10145 99 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 KITP10721 976 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 PROZP22891 400 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 SFPQP23246 707 aaKnown RBP eCLIP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 OAS2P29728 719 aaKnown RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 PTPN7P35236 360 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 PPM1AP35813 382 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 STT3AP46977 705 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 PIK3CGP48736 1102 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 RPS6KA3P51812 740 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 COPAP53621 1224 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 RWDD2BP57060 319 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 UBASH3AP57075 661 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 BPIFB4P59827 614 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 DEFB103AP81534 67 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 BIRC3Q13489 604 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 STIM1Q13586 685 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 FAM187BQ17R55 369 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 PABPC1LQ4VXU2 614 aaKnown RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 KHDC1LQ5JSQ8 128 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 FAM209BQ5JX69 171 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 GLRA4Q5JXX5 417 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 HHATQ5VTY9 493 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 TTC19Q6DKK2 380 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 CENPPQ6IPU0 288 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 IRGCQ6NXR0 463 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 NOTUMQ6P988 496 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 ZNF449Q6P9G9 518 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 FIP1L1Q6UN15 594 aaKnown RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 CRELD2Q6UXH1 353 aaPredicted RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 SEM1Q6ZVN7 128 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 CCDC91Q7Z6B0 441 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 SNX32Q86XE0 403 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 EFCAB13Q8IY85 973 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 ZDHHC14Q8IZN3 488 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 CMTM4Q8IZR5 234 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 NKAPQ8N5F7 415 aaKnown RBP5.22□□□□□ -1.57
SF3A3-202ENST00000460925 SH2D3CQ8N5H7 860 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 TEX19Q8NA77 164 aa5.22□□□□□ -1.57
SF3A3-202ENST00000460925 MLKLQ8NB16 471 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms