RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 CHRNA4P43681 627 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 TNK2Q07912 1038 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 IFFO1Q0D2I5 559 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 SMAD1Q15797 465 aaKnown RBP17.1■□□□□ 0.33
NELFCD-201ENST00000460601 LONRF1Q17RB8 773 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 CTC1Q2NKJ3 1217 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 SPDYCQ5MJ68 293 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 RNF43Q68DV7 783 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 LRRC8BQ6P9F7 803 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 FIBINQ8TAL6 211 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 ARRDC2Q8TBH0 407 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 ARL8AQ96BM9 186 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 IMP4Q96G21 291 aaKnown RBP17.1■□□□□ 0.33
NELFCD-201ENST00000460601 CFAP36Q96G28 342 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 LRCH3Q96II8 777 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 MRGPRX2Q96LB1 330 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 MYADMQ96S97 322 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 DUS2Q9NX74 493 aaKnown RBP17.1■□□□□ 0.33
NELFCD-201ENST00000460601 ZMYM5Q9UJ78 669 aa17.1■□□□□ 0.33
NELFCD-201ENST00000460601 FCF1Q9Y324 198 aaKnown RBP17.1■□□□□ 0.33
NELFCD-201ENST00000460601 SUN1O94901 812 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 ARSAP15289 507 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 CTSOP43234 321 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-201ENST00000460601 CDK16Q00536 496 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 EFTUD2Q15029 972 aaKnown RBP eCLIP17.09■□□□□ 0.331e-7■■■□□ 17.7
NELFCD-201ENST00000460601 TANGO2Q6ICL3 276 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 C3orf62Q6ZUJ4 267 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 DNAAF3Q8N9W5 541 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 RPL10LQ96L21 214 aaKnown RBP17.09■□□□□ 0.33
NELFCD-201ENST00000460601 SEMA3CQ99985 751 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 CENPHQ9H3R5 247 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 EBF3Q9H4W6 596 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 SYBUQ9NX95 663 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 TBC1D14Q9P2M4 693 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 COL6A3P12111 3177 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 HEPACAM2A8MVW5 462 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 TMCC1O94876 653 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 TCF3P15923 654 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 PRPSAP1Q14558 356 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 CYTH1Q15438 398 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 SKIDA1Q1XH10 827 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 FUT11Q495W5 492 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 CCDC38Q502W7 563 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 CERCAMQ5T4B2 595 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 CASC4Q6P4E1 433 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 BPIFB1Q8TDL5 484 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 LMLNQ96KR4 655 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 SH3GL2Q99962 352 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 FICDQ9BVA6 458 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 CINPQ9BW66 212 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-201ENST00000460601 SLC25A51Q9H1U9 297 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 POMKQ9H5K3 350 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 XAB2Q9HCS7 855 aaKnown RBP17.09■□□□□ 0.33
NELFCD-201ENST00000460601 CTNNAL1Q9UBT7 734 aa17.09■□□□□ 0.33
NELFCD-201ENST00000460601 AAR2Q9Y312 384 aaKnown RBP17.09■□□□□ 0.33
NELFCD-201ENST00000460601 EIF3HO15372 352 aaKnown RBP eCLIP17.08■□□□□ 0.33
NELFCD-201ENST00000460601 SMAD6O43541 496 aaKnown RBP17.08■□□□□ 0.33
NELFCD-201ENST00000460601 CYP17A1P05093 508 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 BMP1P13497 986 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 IFNAR2P48551 515 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 STK19P49842 368 aaPredicted RBP17.08■□□□□ 0.33
NELFCD-201ENST00000460601 SARNPP82979 210 aaKnown RBP17.08■□□□□ 0.33
NELFCD-201ENST00000460601 MESP2Q0VG99 397 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 DHCR24Q15392 516 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 EML3Q32P44 896 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 PLEKHG6Q3KR16 790 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 TTMPQ5BVD1 217 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 ATAT1Q5SQI0 421 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 KCTD16Q68DU8 428 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 CES3Q6UWW8 571 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 ZNF783Q6ZMS7 281 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 C12orf40Q86WS4 652 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 PALM2Q8IXS6 379 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 DCAF4L2Q8NA75 395 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 OSCP1Q8WVF1 389 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 MRRFQ96E11 262 aaKnown RBP17.08■□□□□ 0.33
NELFCD-201ENST00000460601 FSD1LQ9BXM9 530 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 PHACTR1Q9C0D0 580 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 POLR1EQ9GZS1 481 aaKnown RBP17.08■□□□□ 0.33
NELFCD-201ENST00000460601 LRRC40Q9H9A6 602 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 GDE1Q9NZC3 331 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 ZC3H7BQ9UGR2 993 aaKnown RBP17.08■□□□□ 0.33
NELFCD-201ENST00000460601 CDH7Q9ULB5 785 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 VCANP13611 3396 aa17.08■□□□□ 0.33
NELFCD-201ENST00000460601 TLDC2A0PJX2 215 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 CCDC78A2IDD5 438 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 ATP9BO43861 1147 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 ANXA9O76027 345 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 HOXB8P17481 243 aaPredicted RBP17.08■□□□□ 0.32
NELFCD-201ENST00000460601 SCNN1BP51168 640 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 WNT3AP56704 352 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 KRT71Q3SY84 523 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 CES5AQ6NT32 575 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 LRIG3Q6UXM1 1119 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 KLHDC8BQ8IXV7 354 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 UNC5BQ8IZJ1 945 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 ZNF599Q96NL3 588 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 PSKH2Q96QS6 385 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 TBL1YQ9BQ87 522 aa17.08■□□□□ 0.32
NELFCD-201ENST00000460601 MGME1Q9BQP7 344 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms