RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 XPNPEP1Q9NQW7 623 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 CCM2LQ9NUG4 571 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 GOLGA6AQ9NYA3 693 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 SLAMF8Q9P0V8 285 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 DEC1Q9P2X7 70 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ASH2LQ9UBL3 628 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ARHGAP26Q9UNA1 814 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 MAGED2Q9UNF1 606 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 RAD54BQ9Y620 910 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 TAF6LQ9Y6J9 622 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 SLCO1B1Q9Y6L6 691 aa4.27□□□□□ -1.73
ECHDC1-211ENST00000460558 POLEQ07864 2286 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 TACC2O95359 2948 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 CNTRLQ7Z7A1 2325 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 KIAA1324LA8MWY0 1029 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 KCNJ18B7U540 433 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SCDO00767 359 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 KDM1AO60341 852 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 BUB1BO60566 1050 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 MAFKO60675 156 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 RTN2O75298 545 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 H2AFYO75367 372 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 TULP3O75386 442 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SNUPNO95149 360 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 LUC7L3O95232 432 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 CLDN1O95832 211 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 IGLV3-19P01714 112 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 PRKCGP05129 697 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 C8BP07358 591 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 ITGA2BP08514 1039 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 KRT7P08729 469 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 HDCP19113 662 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 FUT4P22083 530 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 GNLYP22749 145 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 GLRA2P23416 452 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 CD27P26842 260 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 ARL2P36404 184 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 MTNR1BP49286 362 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 BCAT1P54687 386 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 POLE2P56282 527 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 GAD2Q05329 585 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SMARCB1Q12824 385 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 BNIP3Q12983 259 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 GTF2H3Q13889 308 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 KIR3DS1Q14943 382 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 ISXQ2M1V0 245 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 GFOD2Q3B7J2 385 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 FUT11Q495W5 492 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SLC39A12Q504Y0 691 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 ZC2HC1CQ53FD0 456 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 HS1BP3Q53T59 392 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 PRAMEF14Q5SWL7 426 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SFMBT2Q5VUG0 894 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 BORAQ6PGQ7 559 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 RHBDF2Q6PJF5 856 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 B3GNT9Q6UX72 402 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 TMTC3Q6ZXV5 915 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 EPM2AIP1Q7L775 607 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 TIPARPQ7Z3E1 657 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 KCNK18Q7Z418 384 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 DTX1Q86Y01 620 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 ZGRF1Q86YA3 2104 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 DCP2Q8IU60 420 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 FAM114A1Q8IWE2 563 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 C4orf19Q8IY42 314 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 TMTC2Q8N394 836 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 OXR1Q8N573 874 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 NCOA7Q8NI08 942 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 EXOC6Q8TAG9 804 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 C9orf43Q8TAL5 461 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SPPL2BQ8TCT7 592 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 IGDCC4Q8TDY8 1250 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 C2orf15Q8WU43 125 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SCFD1Q8WVM8 642 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SEC14L1Q92503 715 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 PRCCQ92733 491 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 GJA10Q969M2 543 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 FOXRED1Q96CU9 486 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SIPA1Q96FS4 1042 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 CCDC120Q96HB5 630 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SLC22A12Q96S37 553 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 ACOX2Q99424 681 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 ABCG4Q9H172 646 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 DCTPP1Q9H773 170 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 TTC12Q9H892 705 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 TNFRSF12AQ9NP84 129 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 GDF3Q9NR23 364 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 BARHL2Q9NY43 387 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SEPT10Q9P0V9 454 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 GCNT4Q9P109 453 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 IP6K2Q9UHH9 426 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 SLC5A6Q9Y289 635 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 ABCA4P78363 2273 aa4.26□□□□□ -1.73
ECHDC1-211ENST00000460558 TCRBV5S2A0A599 114 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 CCDC69A6NI79 296 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 LEFTY2O00292 366 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 ACKR2O00590 384 aa4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 SH2B2O14492 632 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-211ENST00000460558 SLC27A2O14975 620 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms