RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 RNF168Q8IYW5 571 aaPredicted RBP14.33□□□□□ -0.12
ERCC3-205ENST00000460485 ZNF683Q8IZ20 524 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 STKLD1Q8NE28 680 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 CALML6Q8TD86 181 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 C10orf82Q8WW14 230 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 E2F7Q96AV8 911 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 SCLYQ96I15 445 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 DDX50Q9BQ39 737 aaKnown RBP14.33□□□□□ -0.12
ERCC3-205ENST00000460485 FAM167BQ9BTA0 163 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 FSD1LQ9BXM9 530 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 CEP41Q9BYV8 373 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 SLC39A8Q9C0K1 460 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 SP110Q9HB58 689 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 PCMTD2Q9NV79 361 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 SLC17A7Q9P2U7 560 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 AFF4Q9UHB7 1163 aaKnown RBP14.33□□□□□ -0.12
ERCC3-205ENST00000460485 KIAA1671Q9BY89 1806 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 WDFY4Q6ZS81 3184 aa14.33□□□□□ -0.12
ERCC3-205ENST00000460485 PLXNA4Q9HCM2 1894 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 ZCWPW2A0A1B0GU75 182 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 SLC38A8A6NNN8 435 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 SIN3BO75182 1162 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 SNUPNO95149 360 aaKnown RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 PAPSS2O95340 614 aaPredicted RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 LATS1O95835 1130 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 MOCS2O96007 188 aaPredicted RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 BPGMP07738 259 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 COL6A2P12110 1019 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 ADRA1AP35348 466 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 KPNA2P52292 529 aaKnown RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 PPARDQ03181 441 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 EFEMP1Q12805 493 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 TAF10Q12962 218 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 TBCCQ15814 346 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 PSMD5Q16401 504 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 RABGAP1LQ5R372 815 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 MROH9Q5TGP6 573 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 KIAA0930Q6ICG6 404 aaPredicted RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 PKN3Q6P5Z2 889 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 NUDCD3Q8IVD9 361 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 HERC6Q8IVU3 1022 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 CNTD1Q8N815 330 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 ATAD1Q8NBU5 361 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 FBXO22Q8NEZ5 403 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 RDH11Q8TC12 318 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 LRRN4Q8WUT4 740 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 INPP5DQ92835 1189 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 TRMT2BQ96GJ1 504 aaKnown RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 CELF6Q96J87 481 aaKnown RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 TSNARE1Q96NA8 513 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 RAB3IPQ96QF0 476 aaPredicted RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 SEPT5Q99719 369 aaPredicted RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 ABCF3Q9NUQ8 709 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 KCNK4Q9NYG8 393 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 UXTQ9UBK9 157 aaPredicted RBP14.32□□□□□ -0.12
ERCC3-205ENST00000460485 DNMT3LQ9UJW3 386 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 MYLKQ15746 1914 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 COL4A6Q14031 1691 aa14.32□□□□□ -0.12
ERCC3-205ENST00000460485 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.31□□□□□ -0.12
ERCC3-205ENST00000460485 HEATR9A2RTY3 570 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 F5H5T6 163 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 TLR5O60602 858 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 RAMP2O60895 175 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 DNAJC6O75061 913 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 UBOX5O94941 541 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 CES1P23141 567 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 TYK2P29597 1187 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 ATP5C1P36542 298 aaKnown RBP14.31□□□□□ -0.12
ERCC3-205ENST00000460485 ETFBP38117 255 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 SLC11A2P49281 568 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 PAPOLAP51003 745 aaKnown RBP14.31□□□□□ -0.12
ERCC3-205ENST00000460485 HK2P52789 917 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 USP46P62068 366 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 PUS10Q3MIT2 529 aaKnown RBP14.31□□□□□ -0.12
ERCC3-205ENST00000460485 RTP2Q5QGT7 225 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 MARC1Q5VT66 337 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 CRLF3Q8IUI8 442 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 TP53INP2Q8IXH6 220 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 TEX26Q8N6G2 289 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 SCG3Q8WXD2 468 aaKnown RBP14.31□□□□□ -0.12
ERCC3-205ENST00000460485 SPOCK2Q92563 424 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 KLF6Q99612 283 aaPredicted RBP14.31□□□□□ -0.12
ERCC3-205ENST00000460485 HERC2P3Q9BVR0 1158 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 RHOJQ9H4E5 214 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 UBE2ZQ9H832 354 aaPredicted RBP14.31□□□□□ -0.12
ERCC3-205ENST00000460485 THAP1Q9NVV9 213 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 RBM22Q9NW64 420 aaKnown RBP eCLIP14.31□□□□□ -0.12
ERCC3-205ENST00000460485 TCAF1Q9Y4C2 921 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 SNX10Q9Y5X0 201 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 ZNF318Q5VUA4 2279 aa14.31□□□□□ -0.12
ERCC3-205ENST00000460485 ABHD14A-ACY1A0A1B0GW23 586 aa14.3□□□□□ -0.12
ERCC3-205ENST00000460485 SLC12A8A0AV02 714 aa14.3□□□□□ -0.12
ERCC3-205ENST00000460485 HMX2A2RU54 273 aa14.3□□□□□ -0.12
ERCC3-205ENST00000460485 TPP1O14773 563 aa14.3□□□□□ -0.12
ERCC3-205ENST00000460485 SNNO75324 88 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-205ENST00000460485 BAIAP3O94812 1187 aa14.3□□□□□ -0.12
ERCC3-205ENST00000460485 UNC5CO95185 931 aa14.3□□□□□ -0.12
ERCC3-205ENST00000460485 ALDOAP04075 364 aaKnown RBP14.3□□□□□ -0.12
ERCC3-205ENST00000460485 SOD2P04179 222 aa14.3□□□□□ -0.12
ERCC3-205ENST00000460485 HLA-DQB2P05538 268 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms