RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 WNT3AP56704 352 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 RPS24P62847 133 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 CRADDP78560 199 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 SMAD3P84022 425 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 ZXDBP98169 803 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 IL9RQ01113 521 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 NSUN2Q08J23 767 aaKnown RBP eCLIP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 ILF2Q12905 390 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 OLIG2Q13516 323 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 IHHQ14623 411 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 SLC1A5Q15758 541 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 DBN1Q16643 649 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 PDK4Q16654 411 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 INSCQ1MX18 579 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 INO80DQ53TQ3 878 aaPredicted RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 RALGPS1Q5JS13 557 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 CERCAMQ5T4B2 595 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 PDPK2PQ6A1A2 396 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 KIAA0930Q6ICG6 404 aaPredicted RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 CXorf57Q6NSI4 855 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 PACS1Q6VY07 963 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 TMC7Q7Z402 723 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 YTHDF3Q7Z739 585 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 CTAGE3PQ8IX95 158 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 LRRC34Q8IZ02 419 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 C4orf33Q8N1A6 199 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 PGBD5Q8N414 524 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 LEMD2Q8NC56 503 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 USP33Q8TEY7 942 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 MRPS31Q92665 395 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 WBP2Q969T9 261 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 ALG14Q96F25 216 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 FEM1CQ96JP0 617 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 SAMD11Q96NU1 681 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 SLC22A12Q96S37 553 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 TCF25Q9BQ70 676 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 TRIM56Q9BRZ2 755 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 ZBED2Q9BTP6 218 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 POLR1EQ9GZS1 481 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 MTIF3Q9H2K0 278 aaKnown RBP8.17□□□□□ -1.1
SFPQ-202ENST00000460428 UGT1A7Q9HAW7 530 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 UGT1A10Q9HAW8 530 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 UGT1A8Q9HAW9 530 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 SEPT3Q9UH03 358 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 TCAF1Q9Y4C2 921 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 OR51B4Q9Y5P0 310 aa8.17□□□□□ -1.1
SFPQ-202ENST00000460428 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 A0A0D9SEW6 157 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 LCHNA4D1U4 455 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 LINC01553A4QN01 128 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 MROH6A6NGR9 719 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 F5H423 210 aaPredicted RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 KLF11O14901 512 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 ATP9BO43861 1147 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 TLL1O43897 1013 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 LPXNO60711 386 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 SPAG7O75391 227 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 PIAS1O75925 651 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 HNRNPA1P09651 372 aaKnown RBP eCLIP8.16□□□□□ -1.15e-10■■□□□ 14.4
SFPQ-202ENST00000460428 ATXN1LP0C7T5 689 aaKnown RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 PYGBP11216 843 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 HLA-DPA1P20036 260 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 CA4P22748 312 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 GABRR2P28476 465 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 SPRP35270 261 aaPredicted RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 ARCN1P48444 511 aaKnown RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 CCT5P48643 541 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 PLK1P53350 603 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 LIMK2P53671 638 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 OXCT1P55809 520 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 ACVR1Q04771 509 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 ZNF177Q13360 481 aaPredicted RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 LAMB3Q13751 1172 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 CAMK1Q14012 370 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 ITIH4Q14624 930 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 QPCTQ16769 361 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 GKAP1Q5VSY0 366 aaPredicted RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 FYB2Q5VWT5 728 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 TXNDC8Q6A555 127 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 CASC4Q6P4E1 433 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 RFWD3Q6PCD5 774 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 LVRNQ6Q4G3 990 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 NLRP9Q7RTR0 991 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 LCA5Q86VQ0 697 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 LMNTD2Q8IXW0 634 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 UNC5BQ8IZJ1 945 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 CFAP52Q8N1V2 620 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 ELMOD1Q8N336 334 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 BBS5Q8N3I7 341 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 HJURPQ8NCD3 748 aaPredicted RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 IPMKQ8NFU5 416 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 OR52K2Q8NGK3 314 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 TCP10LQ8TDR4 215 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 POF1BQ8WVV4 589 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 DYDC1Q8WWB3 177 aa8.16□□□□□ -1.1
SFPQ-202ENST00000460428 SCG3Q8WXD2 468 aaKnown RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 ZNF669Q96BR6 464 aaPredicted RBP8.16□□□□□ -1.1
SFPQ-202ENST00000460428 MRRFQ96E11 262 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms