RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ISG20Q96AZ6 181 aaKnown RBP23.22■■□□□ 1.31
PTPN4-207ENST00000460162 TBC1D31Q96DN5 1066 aa23.22■■□□□ 1.31
PTPN4-207ENST00000460162 PCDHB18PQ96TA0 734 aa23.22■■□□□ 1.31
PTPN4-207ENST00000460162 HEPHQ9BQS7 1158 aa23.22■■□□□ 1.31
PTPN4-207ENST00000460162 SELENOOQ9BVL4 669 aa23.22■■□□□ 1.31
PTPN4-207ENST00000460162 ADAM22Q9P0K1 906 aa23.22■■□□□ 1.31
PTPN4-207ENST00000460162 RALYQ9UKM9 306 aaKnown RBP23.22■■□□□ 1.31
PTPN4-207ENST00000460162 CA5BQ9Y2D0 317 aa23.22■■□□□ 1.31
PTPN4-207ENST00000460162 FCF1Q9Y324 198 aaKnown RBP23.22■■□□□ 1.31
PTPN4-207ENST00000460162 ARID1BQ8NFD5 2236 aaPredicted RBP23.21■■□□□ 1.31
PTPN4-207ENST00000460162 GOLGA6L22H0YM25 854 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 SLC31A1O15431 190 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 LRIG2O94898 1065 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 PCDH8O95206 1070 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 GJB6O95452 261 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 ADRB3P13945 408 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 GPD1P21695 349 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 DNAJC3Q13217 504 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 CAMK2BQ13554 666 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 TMEM259Q4ZIN3 620 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 KIAA1161Q6NSJ0 714 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 PHLDB2Q86SQ0 1253 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 ZSCAN30Q86W11 494 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 PLPP6Q8IY26 295 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 CCDC185Q8N715 623 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 FAM174AQ8TBP5 190 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 TSC1Q92574 1164 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 ARHGEF2Q92974 986 aaKnown RBP23.21■■□□□ 1.31
PTPN4-207ENST00000460162 ERGIC2Q96RQ1 377 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 MYOCQ99972 504 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 MAGEH1Q9H213 219 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 NDFIP2Q9NV92 336 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 TRPM6Q9BX84 2022 aa23.21■■□□□ 1.31
PTPN4-207ENST00000460162 FAM149AA5PLN7 773 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 FAM72CH0Y354 149 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 L1CAMP32004 1257 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 HNF1BP35680 557 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 ACVRL1P37023 503 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 UBXN1Q04323 297 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 ILKQ13418 452 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 FAM72AQ5TYM5 149 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 FAM72DQ6L9T8 149 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 MON1BQ7L1V2 547 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 FAM72BQ86X60 149 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 PDCD7Q8N8D1 485 aaKnown RBP23.2■■□□□ 1.3
PTPN4-207ENST00000460162 LRIG1Q96JA1 1093 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 LHX6Q9UPM6 363 aa23.2■■□□□ 1.3
PTPN4-207ENST00000460162 ZFR2Q9UPR6 939 aaKnown RBP23.2■■□□□ 1.3
PTPN4-207ENST00000460162 LRRC10BA6NIK2 292 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 AP1G1O43747 822 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 RAMP2O60895 175 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 CD160O95971 181 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 PLEKP08567 350 aaPredicted RBP23.19■■□□□ 1.3
PTPN4-207ENST00000460162 RFC1P35251 1148 aaPredicted RBP23.19■■□□□ 1.3
PTPN4-207ENST00000460162 DNA2P51530 1060 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 SEL1L3Q68CR1 1132 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 GCNT7Q6ZNI0 430 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 PARS2Q7L3T8 475 aaKnown RBP23.19■■□□□ 1.3
PTPN4-207ENST00000460162 ABI3BPQ7Z7G0 1075 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 MARCH9Q86YJ5 346 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 KLK6Q92876 244 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 TM6SF2Q9BZW4 377 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 ZDHHC6Q9H6R6 413 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 FZD3Q9NPG1 666 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 SEPT11Q9NVA2 429 aaKnown RBP23.19■■□□□ 1.3
PTPN4-207ENST00000460162 KLHL11Q9NVR0 708 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 DNAI1Q9UI46 699 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 HPCAL4Q9UM19 191 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 GPSM3Q9Y4H4 160 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 LAMA5O15230 3695 aa23.19■■□□□ 1.3
PTPN4-207ENST00000460162 ADAMTS20P59510 1910 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 TRABD2BA6NFA1 517 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 SDC3O75056 442 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 GSRP00390 522 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 RPS21P63220 83 aaKnown RBP23.18■■□□□ 1.3
PTPN4-207ENST00000460162 C1QBPQ07021 282 aaKnown RBP23.18■■□□□ 1.3
PTPN4-207ENST00000460162 POLD3Q15054 466 aaPredicted RBP23.18■■□□□ 1.3
PTPN4-207ENST00000460162 FBXL19Q6PCT2 694 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 WDR59Q6PJI9 974 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 APTXQ7Z2E3 356 aaKnown RBP23.18■■□□□ 1.3
PTPN4-207ENST00000460162 OR13H1Q8NG92 308 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 CALN1Q9BXU9 219 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 HECAQ9UBI9 543 aaPredicted RBP23.18■■□□□ 1.3
PTPN4-207ENST00000460162 FADS3Q9Y5Q0 445 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 ACTL7AQ9Y615 435 aa23.18■■□□□ 1.3
PTPN4-207ENST00000460162 ANKRD62A6NC57 917 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 ZSCAN5CA6NGD5 496 aaPredicted RBP23.17■■□□□ 1.3
PTPN4-207ENST00000460162 SIGLEC16A6NMB1 481 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 A6NNZ2 444 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 MBD3O95983 291 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 CKMT2P17540 419 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 CDK11BP21127 795 aaKnown RBP23.17■■□□□ 1.3
PTPN4-207ENST00000460162 NCAPHQ15003 741 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 PROX2Q3B8N5 592 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 EFHC2Q5JST6 749 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 DNAJC24Q6P3W2 148 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 KYAT3Q6YP21 454 aaKnown RBP23.17■■□□□ 1.3
PTPN4-207ENST00000460162 SLFN11Q7Z7L1 901 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 OR2AP1Q8NGE2 309 aa23.17■■□□□ 1.3
PTPN4-207ENST00000460162 RAB7BQ96AH8 199 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms