RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 MROH8Q9H579 483 aa3.61□□□□□ -1.83
VPS8-215ENST00000460158 PRKRIP1Q9H875 184 aaPredicted RBP3.61□□□□□ -1.83
VPS8-215ENST00000460158 PLEKHA5Q9HAU0 1116 aa3.61□□□□□ -1.83
VPS8-215ENST00000460158 WASH6PQ9NQA3 447 aa3.61□□□□□ -1.83
VPS8-215ENST00000460158 SMYD2Q9NRG4 433 aa3.61□□□□□ -1.83
VPS8-215ENST00000460158 TRNAU1APQ9NX07 287 aaKnown RBP3.61□□□□□ -1.83
VPS8-215ENST00000460158 AGO2Q9UKV8 859 aaKnown RBP3.61□□□□□ -1.83
VPS8-215ENST00000460158 SUFUQ9UMX1 484 aa3.61□□□□□ -1.83
VPS8-215ENST00000460158 BTBD3Q9Y2F9 522 aa3.61□□□□□ -1.83
VPS8-215ENST00000460158 ZNF804BA4D1E1 1349 aa3.61□□□□□ -1.83
VPS8-215ENST00000460158 SYNRGQ9UMZ2 1314 aa3.61□□□□□ -1.83
VPS8-215ENST00000460158 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 TARSL2A2RTX5 802 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 WDR91A4D1P6 747 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 TRIM64A6NGJ6 449 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 TRIM64BA6NI03 449 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 PRPF4O43172 522 aaKnown RBP eCLIP3.6□□□□□ -1.83
VPS8-215ENST00000460158 TOP3BO95985 862 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 CD4P01730 458 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 HNRNPA1P09651 372 aaKnown RBP eCLIP3.6□□□□□ -1.83
VPS8-215ENST00000460158 GLULP15104 373 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 GJC1P36383 396 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 PGM1P36871 562 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 PTPN9P43378 593 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 MMP14P50281 582 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 CLNS1AP54105 237 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 MPP1Q00013 466 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 PMPCAQ10713 525 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 TBL3Q12788 808 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 TDGQ13569 410 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 KLF9Q13886 244 aaPredicted RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 SMTNL2Q2TAL5 461 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 TTC31Q49AM3 519 aaPredicted RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 C5orf22Q49AR2 442 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 FBXO43Q4G163 708 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 EPHA10Q5JZY3 1008 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 PIK3CD-AS1Q5SR53 167 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 TTC39AQ5SRH9 613 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 UBAP2Q5T6F2 1119 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 VWA5B1Q5TIE3 1220 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 ISM2Q6H9L7 571 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 HMBOX1Q6NT76 420 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 AADACL2Q6P093 401 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 GJB7Q6PEY0 223 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 B4GALNT4Q76KP1 1039 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 GALNT5Q7Z7M9 940 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.6□□□□□ -1.83
VPS8-215ENST00000460158 ZNF713Q8N859 430 aaPredicted RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 LSMEM1Q8N8F7 131 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 SETD9Q8NE22 299 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 MSI2Q96DH6 328 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 ZNF419Q96HQ0 510 aaPredicted RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 CLMNQ96JQ2 1002 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 ZMAT2Q96NC0 199 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 BARD1Q99728 777 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.6□□□□□ -1.83
VPS8-215ENST00000460158 MRPL9Q9BYD2 267 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 XPO4Q9C0E2 1151 aaKnown RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 SPRTNQ9H040 489 aaPredicted RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 LMAN2LQ9H0V9 348 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 HIPK3Q9H422 1215 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 SPAG4Q9NPE6 437 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 THSD1Q9NS62 852 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 ANKEF1Q9NU02 776 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 MSRB1Q9NZV6 116 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 SEL1LQ9UBV2 794 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 ICKQ9UPZ9 632 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 ZNF335Q9H4Z2 1342 aaPredicted RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 ZMYM2Q9UBW7 1377 aa3.6□□□□□ -1.83
VPS8-215ENST00000460158 COL3A1P02461 1466 aaPredicted RBP3.6□□□□□ -1.83
VPS8-215ENST00000460158 A0A0G2JK05 382 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 DNAJC9-AS1A6NH13 148 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 A6NNC1 897 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ZNF814B7Z6K7 855 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 CPLX1O14810 134 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 TLX3O43711 291 aaPredicted RBP3.59□□□□□ -1.83
VPS8-215ENST00000460158 STRNO43815 780 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 CBX6O95503 412 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 BAG2O95816 211 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 DDAH2O95865 285 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 LCKP06239 509 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 XBP1P17861 261 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ELF1P32519 619 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ATP6V1E1P36543 226 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 LIFRP42702 1097 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 MMP13P45452 471 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 VAMP2P63027 116 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 KRT83P78385 493 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 MTX1Q13505 466 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 TRIM29Q14134 588 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 NAA25Q14CX7 972 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ETFDHQ16134 617 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 NFIL3Q16649 462 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ALG10Q5BKT4 473 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ALG10BQ5I7T1 473 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ENTPD8Q5MY95 495 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 CFAP58Q5T655 872 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ASPHD1Q5U4P2 390 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ZNF449Q6P9G9 518 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms