RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 NPLOC4Q8TAT6 608 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 LRRC20Q8TCA0 184 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 TMCO6Q96DC7 493 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CHCHD6Q9BRQ6 235 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 KIFC1Q9BW19 673 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 PRDM8Q9NQV8 689 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 LATS2Q9NRM7 1088 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 WWOXQ9NZC7 414 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 SPEF1Q9Y4P9 236 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 IGSF9BQ9UPX0 1349 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 MAPTP10636 758 aaKnown RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 GRK3P35626 688 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CAPGP40121 348 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 SLC35G1Q2M3R5 365 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 OTUD3Q5T2D3 398 aaPredicted RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 IER5Q5VY09 327 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 ZNF571Q7Z3V5 609 aaPredicted RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 IQCKQ8N0W5 287 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 FAM13CQ8NE31 585 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CYP2W1Q8TAV3 490 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 ART4Q93070 314 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 HAVCR1Q96D42 359 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 ZCWPW1Q9H0M4 648 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 REEP1Q9H902 201 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 ANKHQ9HCJ1 492 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 SSU72Q9NP77 194 aaKnown RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 PEX16Q9Y5Y5 336 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 POLR2AP24928 1970 aaKnown RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 TM7SF2O76062 418 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 SEMA3DO95025 777 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 F9P00740 461 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CD4P01730 458 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CYP1A1P04798 512 aaPredicted RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 ITGB5P18084 799 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 USP46P62068 366 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 ADAM17P78536 824 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CUL2Q13617 745 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 MOGSQ13724 837 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 PHKG1Q16816 387 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 ATP13A5Q4VNC0 1218 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 ERI1Q8IV48 349 aaKnown RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 KBTBD2Q8IY47 623 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 TBC1D21Q8IYX1 336 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 MCFD2Q8NI22 146 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 DGCR6LQ9BY27 220 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 YTHDF1Q9BYJ9 559 aaKnown RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 GPN1Q9HCN4 374 aaPredicted RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 CLN6Q9NWW5 311 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 GABRQQ9UN88 632 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 LAMA4Q16363 1823 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 BCLAF3A2AJT9 711 aaKnown RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 OPLAHO14841 1288 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 SSNA1O43805 119 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 PAEPP09466 180 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 MYBP10242 640 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 PCNAP12004 261 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 GARTP22102 1010 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CDK9P50750 372 aaKnown RBP9.88□□□□□ -0.83
UFD1-205ENST00000459854 ABATP80404 500 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CCL14Q16627 93 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CLEC16AQ2KHT3 1053 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 PLET1Q6UQ28 207 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 MAMDC4Q6UXC1 1216 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 PPTC7Q8NI37 304 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 ETNPPLQ8TBG4 499 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 EPB41L1Q9H4G0 881 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 FAM49BQ9NUQ9 324 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 KLHL28Q9NXS3 571 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 TJP2Q9UDY2 1190 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 CHKBQ9Y259 395 aa9.88□□□□□ -0.83
UFD1-205ENST00000459854 PSMD12O00232 456 aaPredicted RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 NADKO95544 446 aaPredicted RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 SLC2A3P11169 496 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 CYP11B1P15538 503 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 AP1S2P56377 157 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 FBXW4P57775 412 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 SYCE2Q6PIF2 218 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 TRPV1Q8NER1 839 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 HM13Q8TCT9 377 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 MTIF3Q9H2K0 278 aaKnown RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 RIBC2Q9H4K1 309 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ARMC7Q9H6L4 198 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.87□□□□□ -0.83
UFD1-205ENST00000459854 MKLN1Q9UL63 735 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 CORO2BQ9UQ03 480 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 PTGES3LE9PB15 166 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 GSC2O15499 205 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 TMCC2O75069 709 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 SIN3BO75182 1162 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 UGT2B11O75310 529 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 SOAT1P35610 550 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 PRKCIP41743 596 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 PSME3P61289 254 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 HSF2Q03933 536 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 MTA1Q13330 715 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 ZSWIM7Q19AV6 140 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 XKRXQ6PP77 449 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 PEG10Q86TG7 708 aaKnown RBP9.87□□□□□ -0.83
UFD1-205ENST00000459854 TTC7BQ86TV6 843 aa9.87□□□□□ -0.83
UFD1-205ENST00000459854 SLCO6A1Q86UG4 719 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms