RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 Q6ZSR6 202 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 PTAR1Q7Z6K3 402 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-227ENST00000458564 PCDH20Q8N6Y1 951 aaKnown RBP10.65□□□□□ -0.7
HDLBP-227ENST00000458564 GRIN3AQ8TCU5 1115 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 KCNE4Q8WWG9 221 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 LENG8Q96PV6 779 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-227ENST00000458564 CRACR2AQ9BSW2 395 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 SLC17A9Q9BYT1 436 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 SIK2Q9H0K1 926 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 WDCPQ9H6R7 721 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 DNAJC28Q9NX36 388 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 ZNF212Q9UDV6 495 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 STAP1Q9ULZ2 295 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 FADS3Q9Y5Q0 445 aa10.65□□□□□ -0.7
HDLBP-227ENST00000458564 COL27A1Q8IZC6 1860 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-227ENST00000458564 TRPM6Q9BX84 2022 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 ILVBLA1L0T0 632 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 POM121BA6NF01 834 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 H3BM21 787 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 TPP1O14773 563 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 RAD51BO15315 384 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 TCEA3O75764 348 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 ZMPSTE24O75844 475 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 NEBLO76041 1014 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 F9P00740 461 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 TFE3P19532 575 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-227ENST00000458564 SLC9A1P19634 815 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 CDH5P33151 784 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-227ENST00000458564 USP8P40818 1118 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 RECQLP46063 649 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-227ENST00000458564 SERPINH1P50454 418 aaKnown RBP10.64□□□□□ -0.71
HDLBP-227ENST00000458564 STX17P56962 302 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 PTK2Q05397 1052 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 SLC20A2Q08357 652 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 ARHGAP44Q17R89 818 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 EXOC3L4Q17RC7 722 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 TAF1BQ53T94 588 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-227ENST00000458564 RETSATQ6NUM9 610 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 LRRC31Q6UY01 552 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 LINGO4Q6UY18 593 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 GBP6Q6ZN66 633 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 BNIPLQ7Z465 357 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 TFAP2DQ7Z6R9 452 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 PLPP6Q8IY26 295 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 DENND6BQ8NEG7 585 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 TPCN2Q8NHX9 752 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 IFI44Q8TCB0 444 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 MAPK15Q8TD08 544 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 ASB12Q8WXK4 309 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 COL26A1Q96A83 441 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 NAF1Q96HR8 494 aaKnown RBP10.64□□□□□ -0.71
HDLBP-227ENST00000458564 FEM1CQ96JP0 617 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 TBATAQ96M53 351 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 KLF6Q99612 283 aaPredicted RBP10.64□□□□□ -0.71
HDLBP-227ENST00000458564 ABCG4Q9H172 646 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 TNKS2Q9H2K2 1166 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 SYNCQ9H7C4 482 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 CAAP1Q9H8G2 361 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 CPNE5Q9HCH3 593 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.64□□□□□ -0.71
HDLBP-227ENST00000458564 SALL4Q9UJQ4 1053 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 PCDHGA8Q9Y5G5 932 aa10.64□□□□□ -0.71
HDLBP-227ENST00000458564 A0A1W2PNU3 283 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-227ENST00000458564 EME2A4GXA9 379 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-227ENST00000458564 J3QKU1 62 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 AQP9O43315 295 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 PAK4O96013 591 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-227ENST00000458564 MYF5P13349 255 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 TGM2P21980 687 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 PON1P27169 355 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 OR1E1P30953 314 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 L1CAMP32004 1257 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 KRT9P35527 623 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 MLLT3P42568 568 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-227ENST00000458564 GABRB2P47870 512 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 CCNHP51946 323 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-227ENST00000458564 PFN3P60673 137 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 APBA1Q02410 837 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 VAC14Q08AM6 782 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 SLC25A52Q3SY17 297 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 ZNF542PQ5EBM4 170 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 GUSBP11Q6P575 273 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 PARS2Q7L3T8 475 aaKnown RBP10.63□□□□□ -0.71
HDLBP-227ENST00000458564 SLC47A2Q86VL8 602 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 OR7D4Q8NG98 312 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 TTC9Q92623 222 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 RAB7BQ96AH8 199 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 ISG20Q96AZ6 181 aaKnown RBP10.63□□□□□ -0.71
HDLBP-227ENST00000458564 VCPIP1Q96JH7 1222 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 SLC46A1Q96NT5 459 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 HAPLN3Q96S86 360 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 HEPHQ9BQS7 1158 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 C1QTNF2Q9BXJ5 285 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 MPP6Q9NZW5 540 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 KLF15Q9UIH9 416 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 SATB2Q9UPW6 733 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 MYO18BQ8IUG5 2567 aa10.63□□□□□ -0.71
HDLBP-227ENST00000458564 BOD1L1Q8NFC6 3051 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 SPTA1P02549 2419 aa10.62□□□□□ -0.71
HDLBP-227ENST00000458564 CDRT15L2A8MXV6 281 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms