RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 CPNE1Q99829 537 aa16.6■□□□□ 0.25
CAPN13-203ENST00000458085 KLF16Q9BXK1 252 aaPredicted RBP16.6■□□□□ 0.25
CAPN13-203ENST00000458085 IQCGQ9H095 443 aaKnown RBP16.6■□□□□ 0.25
CAPN13-203ENST00000458085 MANSC1Q9H8J5 431 aa16.6■□□□□ 0.25
CAPN13-203ENST00000458085 ENTPD7Q9NQZ7 604 aa16.6■□□□□ 0.25
CAPN13-203ENST00000458085 MRPL17Q9NRX2 175 aaKnown RBP16.6■□□□□ 0.25
CAPN13-203ENST00000458085 DONSONQ9NYP3 566 aa16.6■□□□□ 0.25
CAPN13-203ENST00000458085 STARD13Q9Y3M8 1113 aa16.6■□□□□ 0.25
CAPN13-203ENST00000458085 ARNTP27540 789 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 SLC11A2P49281 568 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 MPP3Q13368 585 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 CES4AQ5XG92 561 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 C16orf46Q6P387 395 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 CMC1Q7Z7K0 106 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 ARRDC2Q8TBH0 407 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 RBBP8Q99708 897 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 TXNDC16Q9P2K2 825 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 AGO1Q9UL18 857 aaKnown RBP16.59■□□□□ 0.25
CAPN13-203ENST00000458085 ZBBXA8MT70 800 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 TSPAN3O60637 253 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 PRAMEF11O60813 436 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 FGF18O76093 207 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 HSPA8P11142 646 aaKnown RBP16.59■□□□□ 0.25
CAPN13-203ENST00000458085 GLDCP23378 1020 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 HOXD9P28356 352 aaPredicted RBP16.59■□□□□ 0.25
CAPN13-203ENST00000458085 ELF1P32519 619 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 CRHR1P34998 444 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 CA8P35219 290 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 LIG3P49916 1009 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 YBEYP58557 167 aaPredicted RBP16.59■□□□□ 0.25
CAPN13-203ENST00000458085 ZXDBP98169 803 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 LBRQ14739 615 aaKnown RBP16.59■□□□□ 0.25
CAPN13-203ENST00000458085 VEPH1Q14D04 833 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 ACBD5Q5T8D3 534 aaPredicted RBP16.59■□□□□ 0.25
CAPN13-203ENST00000458085 GRTP1Q5TC63 336 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 TCEAL8Q8IYN2 117 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 DCLK2Q8N568 766 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 PLD4Q96BZ4 506 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 PDFQ9HBH1 243 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 ARL2BPQ9Y2Y0 163 aa16.59■□□□□ 0.25
CAPN13-203ENST00000458085 MTO1Q9Y2Z2 717 aaKnown RBP16.59■□□□□ 0.25
CAPN13-203ENST00000458085 AP3B1O00203 1094 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 CSPG5O95196 566 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 PDE1BQ01064 536 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 OVGP1Q12889 678 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 FSTL4Q6MZW2 842 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 TRPM8Q7Z2W7 1104 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 ZFRQ96KR1 1074 aaKnown RBP16.58■□□□□ 0.25
CAPN13-203ENST00000458085 MCMBPQ9BTE3 642 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 ATP13A1Q9HD20 1204 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 EMCNQ9ULC0 261 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 TCAF1Q9Y4C2 921 aa16.58■□□□□ 0.25
CAPN13-203ENST00000458085 PLXNA4Q9HCM2 1894 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 NRG2O14511 850 aaPredicted RBP16.58■□□□□ 0.24
CAPN13-203ENST00000458085 HGSO14964 777 aaPredicted RBP16.58■□□□□ 0.24
CAPN13-203ENST00000458085 EFCAB14O75071 495 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 OBSL1O75147 1896 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 F11P03951 625 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 CNPP09543 421 aaKnown RBP16.58■□□□□ 0.24
CAPN13-203ENST00000458085 PGGT1BP53609 377 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 LIMK2P53671 638 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 IRX4P78413 519 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 GNA12Q03113 381 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 GRAMD1AQ96CP6 724 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 ZBP1Q9H171 429 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 CAB39LQ9H9S4 337 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 IL21Q9HBE4 155 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 TRPC7Q9HCX4 862 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 IL23AQ9NPF7 189 aa16.58■□□□□ 0.24
CAPN13-203ENST00000458085 CXXC1Q9P0U4 656 aaPredicted RBP16.58■□□□□ 0.24
CAPN13-203ENST00000458085 DOCK6Q96HP0 2047 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 GSRP00390 522 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 PRKCGP05129 697 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 ARCN1P48444 511 aaKnown RBP16.57■□□□□ 0.24
CAPN13-203ENST00000458085 EPHB3P54753 998 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 TNK2Q07912 1038 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 MSLNQ13421 630 aaPredicted RBP16.57■□□□□ 0.24
CAPN13-203ENST00000458085 SEPT6Q14141 434 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 DLG2Q15700 870 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 CNGA3Q16281 694 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 TXNDC8Q6A555 127 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 C10orf67Q8IYJ2 551 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 NSMCE1Q8WV22 266 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 TADA1Q96BN2 335 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 PPP1R2P1Q96PQ5 205 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 SNX15Q9NRS6 342 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 ZNF358Q9NW07 568 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
CAPN13-203ENST00000458085 TGM5O43548 720 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 BAIAP3O94812 1187 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 VAPBO95292 243 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 MBL2P11226 248 aaPredicted RBP16.57■□□□□ 0.24
CAPN13-203ENST00000458085 GABRB3P28472 473 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 LBX1P52954 281 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 CDH4P55283 916 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 MTA1Q13330 715 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 TMCO4Q5TGY1 634 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 POTEHQ6S545 545 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 DENND6AQ8IWF6 608 aa16.57■□□□□ 0.24
CAPN13-203ENST00000458085 ARL14EPQ8N8R7 260 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms