RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 C15orf41Q9Y2V0 281 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 H0Y858 1186 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 CCT3P49368 545 aaKnown RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 RHAGQ02094 409 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 UNC5AQ6ZN44 842 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 PDCD10Q9BUL8 212 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 FAM126AQ9BYI3 521 aaPredicted RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 SLC35C2Q9NQQ7 365 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 EGFL7Q9UHF1 273 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 C1orf167Q5SNV9 1468 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 CEP170BQ9Y4F5 1589 aaPredicted RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 WTIPA6NIX2 430 aaPredicted RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 NCAM2O15394 837 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 PSEN2P49810 448 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 SNAP47Q5SQN1 464 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 ILDR1Q86SU0 546 aaPredicted RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 CCDC185Q8N715 623 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 NAT16Q8N8M0 369 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 PCSK9Q8NBP7 692 aaKnown RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 PSMA8Q8TAA3 256 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 ATXN2LQ8WWM7 1075 aaKnown RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 RABGEF1Q9UJ41 708 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 PCDHAC2Q9Y5I4 1007 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 PAPSS1O43252 624 aaPredicted RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 ADRB2P07550 413 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 MARCKSL1P49006 195 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 SPIBQ01892 262 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 EIF2B5Q13144 721 aaKnown RBP19.87■□□□□ 0.77
SNX27-204ENST00000458013 NDUFAF6Q330K2 333 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 OR10G6Q8NH81 332 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 STK32AQ8WU08 396 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 VPS35Q96QK1 796 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 NAT9Q9BTE0 207 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 NRDE2Q9H7Z3 1164 aa19.87■□□□□ 0.77
SNX27-204ENST00000458013 MYBPC1Q00872 1141 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 DEF8Q6ZN54 512 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 ZCCHC9Q8N567 271 aaKnown RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 CXorf40AQ8TE69 158 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 OR12D3Q9UGF7 316 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 TBC1D3BA6NDS4 549 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 LGR5O75473 907 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 SEMA5AQ13591 1074 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 NTRK3Q16288 839 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 KLHL12Q53G59 568 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 MIIPQ5JXC2 388 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 SPANXN2Q5MJ10 180 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 RBM23Q86U06 439 aaKnown RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 FAM9CQ8IZT9 166 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 REPS1Q96D71 796 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 DNAJC1Q96KC8 554 aaKnown RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 RPL4P36578 427 aaKnown RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 NR2C2P49116 596 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 TMEM119Q4V9L6 283 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 CORO1BQ9BR76 489 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 TNKS2Q9H2K2 1166 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 GALNT8Q9NY28 637 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 IKZF3Q9UKT9 509 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 VAV3Q9UKW4 847 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 SSNA1O43805 119 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 PSIP1O75475 530 aaKnown RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 KCNJ2P63252 427 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 FRG1Q14331 258 aaKnown RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 OFCC1Q8IZS5 231 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 ATP6AP2A0A1C7CYW4 349 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 LIN7AO14910 233 aaPredicted RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 ATP6AP2O75787 350 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 FARP2O94887 1054 aaPredicted RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 PTPN5P54829 565 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 SCRN3Q0VDG4 424 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 MAMLD1Q13495 774 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 FAM171BQ6P995 826 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 KIAA1324Q6UXG2 1013 aaKnown RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 CLHC1Q8NHS4 586 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 PNPT1Q8TCS8 783 aaKnown RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 FERD3LQ96RJ6 166 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 TMEM138Q9NPI0 162 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 TRMT13Q9NUP7 481 aaKnown RBP19.86■□□□□ 0.77
SNX27-204ENST00000458013 SH3GLB1Q9Y371 365 aa19.86■□□□□ 0.77
SNX27-204ENST00000458013 PRG2P13727 222 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 IL2P60568 153 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 CTBP1Q13363 440 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 ARHGAP36Q6ZRI8 547 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 GALNT5Q7Z7M9 940 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 OR52K2Q8NGK3 314 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 CRISPLD1Q9H336 500 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 RIOX1Q9H6W3 641 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 ATP4AP20648 1035 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 NTSP30990 170 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 PPP3CAQ08209 521 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 NR1D2Q14995 579 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 PTPN20Q4JDL3 420 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 USP45Q70EL2 814 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 C12orf29Q8N999 325 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 ARRDC4Q8NCT1 418 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 ZNF540Q8NDQ6 660 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 ETNPPLQ8TBG4 499 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 CDCA5Q96FF9 252 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 NUAK2Q9H093 628 aa19.85■□□□□ 0.77
SNX27-204ENST00000458013 TCEA1P23193 301 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms