RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SLC2A7Q6PXP3 512 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 KCNT2Q6UVM3 1135 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 AKAP14Q86UN6 197 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 REXO1L1PQ8IX06 675 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 SLC15A3Q8IY34 581 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ARFGAP2Q8N6H7 521 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ATG16L2Q8NAA4 619 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 Q8NFD4 153 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 CREB3L4Q8TEY5 395 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 DCAF4Q8WV16 495 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 RFKQ969G6 155 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ZNF653Q96CK0 615 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 HDAC11Q96DB2 347 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 SPACA9Q96E40 222 aaPredicted RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 RBM41Q96IZ5 413 aaKnown RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 RPGRIP1Q96KN7 1286 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 CEP19Q96LK0 163 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 CFAP57Q96MR6 1250 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 FAM111AQ96PZ2 611 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 NR1H4Q96RI1 486 aaPredicted RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 OSBPL9Q96SU4 736 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 PRPF18Q99633 342 aaKnown RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 CCDC77Q9BR77 488 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 AARSD1Q9BTE6 412 aaKnown RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 CDK19Q9BWU1 502 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 PINK1Q9BXM7 581 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 TFB2MQ9H5Q4 396 aaKnown RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 ZMAT3Q9HA38 289 aaKnown RBP5.56□□□□□ -1.52
VPS41-209ENST00000457055 SPACA1Q9HBV2 294 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 PNPLA8Q9NP80 782 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 WWOXQ9NZC7 414 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 CFAP97Q9P2B7 532 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 HMGXB4Q9UGU5 601 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 BAIAP2L1Q9UHR4 511 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 NAALADL1Q9UQQ1 740 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 TNFSF13BQ9Y275 285 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 NAALAD2Q9Y3Q0 740 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 TELO2Q9Y4R8 837 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 HS3ST3A1Q9Y663 406 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 ATP23Q9Y6H3 246 aa5.56□□□□□ -1.52
VPS41-209ENST00000457055 PARD3Q8TEW0 1356 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ARHGEF5Q12774 1597 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 SPATA31A5Q5VU36 1347 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 SPATA31A7Q8IWB4 1347 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 TMEM247A6NEH6 219 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ZNF839A8K0R7 811 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 K7ERQ8 282 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 NKRFO15226 690 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS41-209ENST00000457055 PRODHO43272 600 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 FOXS1O43638 330 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PHF2O75151 1096 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 BCAS2O75934 225 aaPredicted RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 KRT37O76014 449 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 RECQL4O94761 1208 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 FGF4P08620 206 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 JMJD7P0C870 316 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PNMA6AP0CW24 399 aaPredicted RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 CSH1P0DML2 217 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CSH2P0DML3 217 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 GAAP10253 952 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 GHRP10912 638 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ACADMP11310 421 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 HNRNPLP14866 589 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS41-209ENST00000457055 ANPEPP15144 967 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 DDX5P17844 614 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 KRT4P19013 534 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CCNA2P20248 432 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CFL1P23528 166 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 NFKBIAP25963 317 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ADRA1BP35368 520 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ETV5P41161 510 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PPP1R2P41236 205 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ZNF41P51814 821 aaPredicted RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 ITGA8P53708 1063 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 RAD23AP54725 363 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PRRX1P54821 245 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ADARP55265 1226 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 IL2P60568 153 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 TSPAN5P62079 268 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 POLR2GP62487 172 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS41-209ENST00000457055 CYP4F2P78329 520 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 MC1RQ01726 317 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CREB5Q02930 508 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 CSTF3Q12996 717 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 CHIT1Q13231 466 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 RCN2Q14257 317 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 DMC1Q14565 340 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ZNF460Q14592 562 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 USP10Q14694 798 aaKnown RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 ARHGAP19Q14CB8 494 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ZMYND11Q15326 602 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 DLGAP5Q15398 846 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ZACNQ401N2 412 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 BEND6Q5SZJ8 279 aaPredicted RBP5.55□□□□□ -1.52
VPS41-209ENST00000457055 MAP3K21Q5TCX8 1036 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 C12orf60Q5U649 245 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 NCAPH2Q6IBW4 605 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 ACAD10Q6JQN1 1059 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 PPP1R2P3Q6NXS1 205 aa5.55□□□□□ -1.52
VPS41-209ENST00000457055 SLC22A25Q6T423 547 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms