RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FRMD1Q8N878 549 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 OR2A12Q8NGT7 310 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 RLN3Q8WXF3 142 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 ALG3Q92685 438 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 VOPP1Q96AW1 172 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 SIPA1Q96FS4 1042 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 TPSD1Q9BZJ3 242 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 CEP44Q9C0F1 390 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 FBRSQ9HAH7 460 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 LZTFL1Q9NQ48 299 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 ITM2CQ9NQX7 267 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 BCCIPQ9P287 314 aaKnown RBP eCLIP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 IPO11Q9UI26 975 aaKnown RBP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 PPM1HQ9ULR3 514 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 FCF1Q9Y324 198 aaKnown RBP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.24□□□□□ -0.77
ATG4A-206ENST00000457035 CACNA1EQ15878 2313 aa10.24□□□□□ -0.77
ATG4A-206ENST00000457035 CABIN1Q9Y6J0 2220 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 DDX3YO15523 660 aaKnown RBP10.23□□□□□ -0.77
ATG4A-206ENST00000457035 MFSD11O43934 449 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 FTCDO95954 541 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 KRT10P13645 584 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 SERPINB6P35237 376 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 P2RY2P41231 377 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 FOXK2Q01167 660 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 GBE1Q04446 702 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 ZBTB16Q05516 673 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 IL10RBQ08334 325 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 ADCY2Q08462 1091 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 CCDC173Q0VFZ6 552 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 GALNT2Q10471 571 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 ELAVL3Q14576 367 aaKnown RBP10.23□□□□□ -0.77
ATG4A-206ENST00000457035 LLGL1Q15334 1064 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 USP39Q53GS9 565 aaKnown RBP10.23□□□□□ -0.77
ATG4A-206ENST00000457035 CARD16Q5EG05 197 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 C22orf39Q6P5X5 142 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 SPOCD1Q6ZMY3 1216 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 DPY19L3Q6ZPD9 716 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 PACS2Q86VP3 889 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 ZNF354CQ86Y25 554 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 LRRC49Q8IUZ0 686 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 MMAAQ8IVH4 418 aaKnown RBP10.23□□□□□ -0.77
ATG4A-206ENST00000457035 REXO1L1PQ8IX06 675 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 PCDH20Q8N6Y1 951 aaKnown RBP10.23□□□□□ -0.77
ATG4A-206ENST00000457035 CHST14Q8NCH0 376 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 UBE2Q2Q8WVN8 375 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 GAB3Q8WWW8 586 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 CASKIN2Q8WXE0 1202 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 PRCCQ92733 491 aaPredicted RBP10.23□□□□□ -0.77
ATG4A-206ENST00000457035 HES6Q96HZ4 224 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 MAK16Q9BXY0 300 aaKnown RBP10.23□□□□□ -0.77
ATG4A-206ENST00000457035 TNKS2Q9H2K2 1166 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 SEMA4AQ9H3S1 761 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 CD93Q9NPY3 652 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 DTLQ9NZJ0 730 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 USP36Q9P275 1121 aaKnown RBP10.23□□□□□ -0.77
ATG4A-206ENST00000457035 SARDHQ9UL12 918 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 PACSIN2Q9UNF0 486 aaPredicted RBP10.23□□□□□ -0.77
ATG4A-206ENST00000457035 INVSQ9Y283 1065 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 FRYLO94915 3013 aa10.23□□□□□ -0.77
ATG4A-206ENST00000457035 hCG_1818297A0A087WSY0 165 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 MIF4GDA9UHW6 222 aaKnown RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 RNF103O00237 685 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 APOL1O14791 398 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 ALOX15BO15296 676 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 BNIP3LO60238 219 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 RNASEH1O60930 286 aaKnown RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 ZNF217O75362 1048 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 RPP40O75818 363 aaKnown RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 TMCC1O94876 653 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 MAP3K6O95382 1288 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 IGLV3-19P01714 112 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 CTSLP07711 333 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 PYGMP11217 842 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 ZFXP17010 805 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 CHRNA3P32297 505 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 SLC8A1P32418 973 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 GARSP41250 739 aaKnown RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 TPMTP51580 245 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 RWDD2BP57060 319 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 COPS2P61201 443 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 CST6Q15828 149 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 PPP2R5EQ16537 467 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 ODF2Q5BJF6 829 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 TFDP3Q5H9I0 405 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 ZNF776Q68DI1 518 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 KIAA1324Q6UXG2 1013 aaKnown RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 ERMP1Q7Z2K6 904 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 RFX6Q8HWS3 928 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 DCLK2Q8N568 766 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 FAM160A2Q8N612 972 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 TMIEQ8NEW7 156 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 OR8D1Q8WZ84 308 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 RBM41Q96IZ5 413 aaKnown RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 TSGA13Q96PP4 275 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 HERPUD2Q9BSE4 406 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 LHX3Q9UBR4 397 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 UBA2Q9UBT2 640 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 MBD1Q9UIS9 605 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-206ENST00000457035 EFR3BQ9Y2G0 817 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms