RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 CARD16Q5EG05 197 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 SEL1L2Q5TEA6 688 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 TMCO4Q5TGY1 634 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 CCDC181Q5TID7 509 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 RASSF3Q86WH2 238 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 SLC13A5Q86YT5 568 aaPredicted RBP14.29□□□□□ -0.12
TIMP1-205ENST00000456754 CCDC13Q8IYE1 715 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 PGBD3Q8N328 593 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 RYBPQ8N488 228 aaPredicted RBP14.29□□□□□ -0.12
TIMP1-205ENST00000456754 P3H4Q92791 437 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 HDAC11Q96DB2 347 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 CEP44Q9C0F1 390 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 RSPH9Q9H1X1 276 aaPredicted RBP14.29□□□□□ -0.12
TIMP1-205ENST00000456754 POLMQ9NP87 494 aaPredicted RBP14.29□□□□□ -0.12
TIMP1-205ENST00000456754 DONSONQ9NYP3 566 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 SEPT10Q9P0V9 454 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 ZKSCAN5Q9Y2L8 839 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 WASF2Q9Y6W5 498 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 ABCA7Q8IZY2 2146 aa14.29□□□□□ -0.12
TIMP1-205ENST00000456754 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
TIMP1-205ENST00000456754 GOLGA6L9A6NEM1 432 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 ZSCAN5CA6NGD5 496 aaPredicted RBP14.28□□□□□ -0.12
TIMP1-205ENST00000456754 F5H423 210 aaPredicted RBP14.28□□□□□ -0.12
TIMP1-205ENST00000456754 APOC4-APOC2K7ER74 178 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 MID1O15344 667 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 CACNA1HO95180 2353 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 PIGNO95427 931 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 JCHAINP01591 159 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 APOC2P02655 101 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 HLA-DQB2P05538 268 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 CHRNA3P32297 505 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 NOMO1Q15155 1222 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 ARSIQ5FYB1 569 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 MUC6Q6W4X9 2439 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 PCDH20Q8N6Y1 951 aaKnown RBP14.28□□□□□ -0.12
TIMP1-205ENST00000456754 CNTD1Q8N815 330 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 C1orf54Q8WWF1 131 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 MAML1Q92585 1016 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 TSGA13Q96PP4 275 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 QKIQ96PU8 341 aaKnown RBP eCLIP14.28□□□□□ -0.12
TIMP1-205ENST00000456754 OSBPL9Q96SU4 736 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 CINPQ9BW66 212 aaPredicted RBP14.28□□□□□ -0.12
TIMP1-205ENST00000456754 CARD9Q9H257 536 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 ZDHHC6Q9H6R6 413 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 PRDM16Q9HAZ2 1276 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 NT5MQ9NPB1 228 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 EFR3BQ9Y2G0 817 aa14.28□□□□□ -0.12
TIMP1-205ENST00000456754 SDK1Q7Z5N4 2213 aa14.27□□□□□ -0.12
TIMP1-205ENST00000456754 FANCMQ8IYD8 2048 aa14.27□□□□□ -0.12
TIMP1-205ENST00000456754 H7C0C1 242 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 KRIT1O00522 736 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 MCF2LO15068 1137 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 AXIN1O15169 862 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 MATN3O15232 486 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 TJP3O95049 919 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 GSRP00390 522 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 IL1BP01584 269 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 FGGP02679 453 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 CCNB1P14635 433 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 MX2P20592 715 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 CCNCP24863 283 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 RBL1P28749 1068 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 MMP13P45452 471 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 ATP5OP48047 213 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 GEMIN4P57678 1058 aaKnown RBP14.27□□□□□ -0.13
TIMP1-205ENST00000456754 EIF3EP60228 445 aaKnown RBP14.27□□□□□ -0.13
TIMP1-205ENST00000456754 NIPAL4Q0D2K0 466 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 WASHC5Q12768 1159 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 ELAVL3Q14576 367 aaKnown RBP14.27□□□□□ -0.13
TIMP1-205ENST00000456754 PDK1Q15118 436 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 CST6Q15828 149 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 MYLK3Q32MK0 819 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 INO80DQ53TQ3 878 aaPredicted RBP14.27□□□□□ -0.13
TIMP1-205ENST00000456754 FAM124AQ86V42 546 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 AADATQ8N5Z0 425 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 OR2AP1Q8NGE2 309 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 PIP4K2CQ8TBX8 421 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 ARRDC3Q96B67 414 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 FAM86C1Q9NVL1 165 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 RBM22Q9NW64 420 aaKnown RBP eCLIP14.27□□□□□ -0.13
TIMP1-205ENST00000456754 PPM1HQ9ULR3 514 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 SNX12Q9UMY4 172 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 CYP8B1Q9UNU6 501 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 TTLL3Q9Y4R7 772 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 R4GN57 208 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 USP34Q70CQ2 3546 aa14.27□□□□□ -0.13
TIMP1-205ENST00000456754 DOCK9Q9BZ29 2069 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 LEFTY1O75610 366 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 BCKDHBP21953 392 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 PTPN3P26045 913 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 CETN2P41208 172 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 NR2C2P49116 596 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 DSC2Q02487 901 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 SNX1Q13596 522 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 ZNF235Q14590 738 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 LRRC73Q5JTD7 316 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 MARC1Q5VT66 337 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 ZNF776Q68DI1 518 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-205ENST00000456754 SYT10Q6XYQ8 523 aa14.26□□□□□ -0.13
TIMP1-205ENST00000456754 PRUNE1Q86TP1 453 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms