RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PPP2R3CQ969Q6 453 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 ZNF669Q96BR6 464 aaPredicted RBP12.62□□□□□ -0.39
LINC00959-201ENST00000456581 SPATA13Q96N96 652 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 NR1H4Q96RI1 486 aaPredicted RBP12.62□□□□□ -0.39
LINC00959-201ENST00000456581 KLHL4Q9C0H6 718 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 ANKRD12Q6UB98 2062 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 CROCCQ5TZA2 2017 aa12.62□□□□□ -0.39
LINC00959-201ENST00000456581 HSPA4LO95757 839 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 COX4I1P13073 169 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 CPA3P15088 417 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 PCSK1P29120 753 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 GATMP50440 423 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 SERPINB9P50453 376 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 MED21Q13503 144 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 INTS6LQ5JSJ4 861 aaKnown RBP12.61□□□□□ -0.39
LINC00959-201ENST00000456581 CERCAMQ5T4B2 595 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 TRAF7Q6Q0C0 670 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 MARK2Q7KZI7 788 aaKnown RBP12.61□□□□□ -0.39
LINC00959-201ENST00000456581 STRA8Q7Z7C7 330 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 TAC4Q86UU9 113 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 GPR152Q8TDT2 470 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 ATP2A3Q93084 1043 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 LRRC39Q96DD0 335 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 GPAMQ9HCL2 828 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 TMEM233B4DJY2 109 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 MSI1O43347 362 aaKnown RBP12.61□□□□□ -0.39
LINC00959-201ENST00000456581 PEX1O43933 1283 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 CCNT2O60583 730 aaKnown RBP12.61□□□□□ -0.39
LINC00959-201ENST00000456581 ALDH1A2O94788 518 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 GPR15P49685 360 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 DPYSQ14117 519 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 PDK3Q15120 406 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 GSTA3Q16772 222 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 FAM171BQ6P995 826 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 RNF180Q86T96 592 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 PCSK9Q8NBP7 692 aaKnown RBP12.61□□□□□ -0.39
LINC00959-201ENST00000456581 ZFAND2BQ8WV99 257 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 CELF6Q96J87 481 aaKnown RBP12.61□□□□□ -0.39
LINC00959-201ENST00000456581 COLEC11Q9BWP8 271 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 TKTL2Q9H0I9 626 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 SIK2Q9H0K1 926 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 CNGB3Q9NQW8 809 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 TXNDC16Q9P2K2 825 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 HSFX1Q9UBD0 423 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 SFMBT1Q9UHJ3 866 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 PHGDHO43175 533 aaKnown RBP12.61□□□□□ -0.39
LINC00959-201ENST00000456581 SMIM18P0DKX4 95 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 UQCRBP14927 111 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 PCSK6P29122 969 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 PBX3P40426 434 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 DPP6P42658 865 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 NR2C2P49116 596 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 NUMBP49757 651 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 NKX3-2P78367 333 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 MS4A2Q01362 244 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 FOLH1Q04609 750 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 TIFABQ6ZNK6 161 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 PID1Q7Z2X4 250 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 SNX32Q86XE0 403 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 FBXW8Q8N3Y1 598 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 GALNT4Q8N4A0 578 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 RAET1EQ8TD07 263 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 ACTRT2Q8TDY3 377 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 CERS2Q96G23 380 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 GLT1D1Q96MS3 346 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 PKMYT1Q99640 499 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 NUF2Q9BZD4 464 aa12.61□□□□□ -0.39
LINC00959-201ENST00000456581 FKBP6O75344 327 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 SRGAP2BP0DMP2 458 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 XRCC1P18887 633 aaPredicted RBP12.6□□□□□ -0.39
LINC00959-201ENST00000456581 SCNN1BP51168 640 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 KLF10Q13118 480 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 NOGQ13253 232 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 STEAP4Q687X5 459 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 IL31Q6EBC2 164 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 ACAD11Q709F0 780 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 LILRA2Q8N149 483 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 TTC9BQ8N6N2 239 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 ACBD6Q9BR61 282 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 FRMD8Q9BZ67 464 aaPredicted RBP12.6□□□□□ -0.39
LINC00959-201ENST00000456581 LIN28AQ9H9Z2 209 aaKnown RBP12.6□□□□□ -0.39
LINC00959-201ENST00000456581 PREBQ9HCU5 417 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 CHRAC1Q9NRG0 131 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 FBXW11Q9UKB1 542 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 SSX2IPQ9Y2D8 614 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 FIS1Q9Y3D6 152 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 A0A096LPK6 155 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 G3V2L1 256 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 DCLK1O15075 740 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 SOAT2O75908 522 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 KLHL2O95198 593 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 ALDH1A1P00352 501 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 PGAM1P18669 254 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 CST5P28325 142 aaPredicted RBP12.6□□□□□ -0.39
LINC00959-201ENST00000456581 OR1G1P47890 313 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 THOP1P52888 689 aa12.6□□□□□ -0.39
LINC00959-201ENST00000456581 CDKL1Q00532 357 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms