RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 RDH11Q8TC12 318 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 UCMAQ8WVF2 138 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 PANX3Q96QZ0 392 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 GATA5Q9BWX5 397 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 PCDHB8Q9UN66 801 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 A0A088AWK7 358 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 CCDC78A2IDD5 438 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 CIB2O75838 187 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 HSPA4LO95757 839 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 AHSGP02765 367 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 GRIK1P39086 918 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 ARCN1P48444 511 aaKnown RBP18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 GEMP55040 296 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 ACTR3P61158 418 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 CAP1Q01518 475 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 NRG1Q02297 640 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 USP4Q13107 963 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 ITGA7Q13683 1181 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 KCNA10Q16322 511 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 FAM26DQ5JW98 314 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 SLC30A9Q6PML9 568 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 ZYG11AQ6WRX3 759 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 LRRC74BQ6ZQY2 392 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 RIPOR1Q6ZS17 1223 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 IPMKQ8NFU5 416 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 FICDQ9BVA6 458 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 COG4Q9H9E3 785 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 MID2Q9UJV3 735 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 BRCA2P51587 3418 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 HTTP42858 3142 aa18.65■□□□□ 0.58
SEMA3B-209ENST00000456560 ARHGEF37A1IGU5 675 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 MEI4A8MW99 385 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 TRPA1O75762 1119 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 DNAJB1P25685 340 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 TRIM71Q2Q1W2 868 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 CCSAPQ6IQ19 270 aaPredicted RBP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 C14orf80Q86SX3 495 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 LCA5Q86VQ0 697 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 MYLK4Q86YV6 388 aaPredicted RBP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 KLHDC9Q8NEP7 349 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 DTX3LQ8TDB6 740 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 SREK1Q8WXA9 508 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 ACE2Q9BYF1 805 aaPredicted RBP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 MRM3Q9HC36 420 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 ZNF212Q9UDV6 495 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 TLK1Q9UKI8 766 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 MAP3K13O43283 966 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 HLA-DQB2P05538 268 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 ARNTP27540 789 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 POLD2P49005 469 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 USP10Q14694 798 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 POU6F1Q14863 301 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 POTEHQ6S545 545 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 POU5F2Q8N7G0 328 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 PPFIBP2Q8ND30 876 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 PTCD2Q8WV60 388 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 PPP1R2P1Q96PQ5 205 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 RBM22Q9NW64 420 aaKnown RBP eCLIP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 CPSF2Q9P2I0 782 aaKnown RBP18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 SCOCQ9UIL1 159 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 HS3ST4Q9Y661 456 aa18.64■□□□□ 0.57
SEMA3B-209ENST00000456560 NYNRINQ9P2P1 1898 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 A0A1W2PQH9 124 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 WASH4PA8MWX3 477 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 PHGDHO43175 533 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 B4GALT3O60512 393 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 SLC35E2BP0CK96 405 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 NUMBP49757 651 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 COPAP53621 1224 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 SLC25A3Q00325 362 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 UGP2Q16851 508 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 ESRP1Q6NXG1 681 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 RTL3Q8N8U3 475 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 MAPK15Q8TD08 544 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 TASP1Q9H6P5 420 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 ENTPD7Q9NQZ7 604 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 PAPOLBQ9NRJ5 636 aaKnown RBP18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 OSER1Q9NX31 292 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 NUDT5Q9UKK9 219 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 TCAF1Q9Y4C2 921 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 ASB3Q9Y575 518 aa18.63■□□□□ 0.57
SEMA3B-209ENST00000456560 TARM1B6A8C7 271 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 E9PAM4 449 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 OR4Q2P0C623 313 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 COL6A2P12110 1019 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 PAPOLAP51003 745 aaKnown RBP18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 PGGT1BP53609 377 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 PRKAA2P54646 552 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 MLLT6P55198 1093 aaPredicted RBP18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 YWHAHQ04917 246 aaPredicted RBP18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 SLC12A1Q13621 1099 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 SLC9B1Q4ZJI4 515 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 C6orf163Q5TEZ5 329 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 TIGD7Q6NT04 549 aaPredicted RBP18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 RANBP10Q6VN20 620 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 RAPH1Q70E73 1250 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 TDRD5Q8NAT2 981 aaKnown RBP18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 PPHLN1Q8NEY8 458 aaKnown RBP18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 STYXQ8WUJ0 223 aa18.62■□□□□ 0.57
SEMA3B-209ENST00000456560 TREX1Q9NSU2 369 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms