RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 BAHD1Q8TBE0 780 aaPredicted RBP18.21■□□□□ 0.51
MSH6-207ENST00000456246 GRIN3AQ8TCU5 1115 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 RHBDD1Q8TEB9 315 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 FNIP1Q8TF40 1166 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 NCAPGQ9BPX3 1015 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 SCNM1Q9BWG6 230 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 ERVMER34-1Q9H9K5 563 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 CBX8Q9HC52 389 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 NDFIP2Q9NV92 336 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 TAS2R14Q9NYV8 317 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 ARHGAP20Q9P2F6 1191 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 SCINQ9Y6U3 715 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 WASF2Q9Y6W5 498 aa18.21■□□□□ 0.51
MSH6-207ENST00000456246 TMEM131Q92545 1883 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 A0A1W2PQJ5 194 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 WASH4PA8MWX3 477 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 TLR4O00206 839 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 ZNF821O75541 412 aaPredicted RBP18.2■□□□□ 0.5
MSH6-207ENST00000456246 LEFTY1O75610 366 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 GSRP00390 522 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 WNT1P04628 370 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 FTH1P19P0C7X4 201 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 MYBL1P10243 752 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 PSMA2P25787 234 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 DNA2P51530 1060 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 NEK3P51956 506 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 NXPH1P58417 271 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 TAS2R38P59533 333 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 SNRPD1P62314 119 aaKnown RBP18.2■□□□□ 0.5
MSH6-207ENST00000456246 PARP15Q460N3 678 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 ZNF571Q7Z3V5 609 aaPredicted RBP18.2■□□□□ 0.5
MSH6-207ENST00000456246 ADAMTS14Q8WXS8 1223 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 ARRDC3Q96B67 414 aa18.2■□□□□ 0.5
MSH6-207ENST00000456246 FCF1Q9Y324 198 aaKnown RBP18.2■□□□□ 0.5
MSH6-207ENST00000456246 BZW2Q9Y6E2 419 aaKnown RBP18.2■□□□□ 0.5
MSH6-207ENST00000456246 TP53BP1Q12888 1972 aaPredicted RBP18.2■□□□□ 0.5
MSH6-207ENST00000456246 TMCO5BA8MYB1 307 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 KDELR3O43731 214 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 RNF8O76064 485 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 CD160O95971 181 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 FTLP02792 175 aaPredicted RBP18.19■□□□□ 0.5
MSH6-207ENST00000456246 ZNF135P52742 658 aaPredicted RBP18.19■□□□□ 0.5
MSH6-207ENST00000456246 FANCCQ00597 558 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 STAT4Q14765 748 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 ST3GAL2Q16842 350 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 INO80DQ53TQ3 878 aaPredicted RBP18.19■□□□□ 0.5
MSH6-207ENST00000456246 KCNT1Q5JUK3 1230 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 RAB44Q7Z6P3 723 aaPredicted RBP18.19■□□□□ 0.5
MSH6-207ENST00000456246 LUZP1Q86V48 1076 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 VPS36Q86VN1 386 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 HORMAD1Q86X24 394 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 OR2AP1Q8NGE2 309 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 FAM174AQ8TBP5 190 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 SYN2Q92777 582 aaPredicted RBP18.19■□□□□ 0.5
MSH6-207ENST00000456246 RAB7BQ96AH8 199 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 OSBPL1AQ9BXW6 950 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 MRPL47Q9HD33 250 aaKnown RBP18.19■□□□□ 0.5
MSH6-207ENST00000456246 HECAQ9UBI9 543 aaPredicted RBP18.19■□□□□ 0.5
MSH6-207ENST00000456246 MSRB2Q9Y3D2 182 aa18.19■□□□□ 0.5
MSH6-207ENST00000456246 A0A1W2PQU0 124 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 TMEM8BA6NDV4 472 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 DDX3XO00571 662 aaKnown RBP eCLIP18.18■□□□□ 0.57e-19■■■■■ 42.4
MSH6-207ENST00000456246 AP1G1O43747 822 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 HYAL3O43820 417 aaPredicted RBP18.18■□□□□ 0.5
MSH6-207ENST00000456246 CREB3O43889 395 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 MAT2AP31153 395 aaKnown RBP18.18■□□□□ 0.5
MSH6-207ENST00000456246 AKT2P31751 481 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 UBASH3AP57075 661 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 TPI1P60174 286 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 OGDHQ02218 1023 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 E4F1Q66K89 784 aaPredicted RBP18.18■□□□□ 0.5
MSH6-207ENST00000456246 KIAA1161Q6NSJ0 714 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 FBXL19Q6PCT2 694 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 UNQ6494/PRO21346Q6UXR6 183 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 ZNF354CQ86Y25 554 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 PSTKQ8IV42 348 aaKnown RBP18.18■□□□□ 0.5
MSH6-207ENST00000456246 UMODL1-AS1Q8N2C9 162 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 PYROXD2Q8N2H3 581 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 TM6SF2Q9BZW4 377 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 ZDHHC6Q9H6R6 413 aa18.18■□□□□ 0.5
MSH6-207ENST00000456246 FAM221BA6H8Z2 402 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 TMEM191CA6NGB0 347 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 KCNK3O14649 394 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 WNT9AO14904 365 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 TNFSF14O43557 240 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 BUB1O43683 1085 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 PCDH8O95206 1070 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 POP4O95707 220 aaKnown RBP18.17■□□□□ 0.5
MSH6-207ENST00000456246 PROS1P07225 676 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 ADRB3P13945 408 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 HNRNPA2B1P22626 353 aaKnown RBP18.17■□□□□ 0.5
MSH6-207ENST00000456246 RXRGP48443 463 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 RAD51Q06609 339 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 ACAP1Q15027 740 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 SKOR2Q2VWA4 1001 aaPredicted RBP18.17■□□□□ 0.5
MSH6-207ENST00000456246 ZNF284Q2VY69 593 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 TDRD12Q587J7 1177 aaKnown RBP18.17■□□□□ 0.5
MSH6-207ENST00000456246 RYBPQ8N488 228 aaPredicted RBP18.17■□□□□ 0.5
MSH6-207ENST00000456246 TMEM145Q8NBT3 493 aa18.17■□□□□ 0.5
MSH6-207ENST00000456246 ZNF653Q96CK0 615 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms