RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.28■□□□□ 0.04
LDLR-202ENST00000455727 GOLGA8TH3BQL2 631 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 SYN3O14994 580 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 PSMG1O95456 288 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 HSPA4LO95757 839 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 PAMP19021 973 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 ABCG1P45844 678 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 USP10Q14694 798 aaKnown RBP15.28■□□□□ 0.04
LDLR-202ENST00000455727 PIK3R6Q5UE93 754 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 EPGNQ6UW88 154 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 RAPH1Q70E73 1250 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 N4BP2L2Q92802 583 aaPredicted RBP15.28■□□□□ 0.04
LDLR-202ENST00000455727 FSD1LQ9BXM9 530 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 ACE2Q9BYF1 805 aaPredicted RBP15.28■□□□□ 0.04
LDLR-202ENST00000455727 SLC25A51Q9H1U9 297 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 NOL6Q9H6R4 1146 aaKnown RBP15.28■□□□□ 0.04
LDLR-202ENST00000455727 PRDM5Q9NQX1 630 aaPredicted RBP15.28■□□□□ 0.04
LDLR-202ENST00000455727 MPP6Q9NZW5 540 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 NUDT5Q9UKK9 219 aa15.28■□□□□ 0.04
LDLR-202ENST00000455727 FAM92AA1XBS5 289 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 H0Y3Z8 333 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 VAPBO95292 243 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 MOCS2O96007 188 aaPredicted RBP15.27■□□□□ 0.04
LDLR-202ENST00000455727 PEX11BO96011 259 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 SLC35E2BP0CK96 405 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 RHOQP17081 205 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 ARNTP27540 789 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 CPOXP36551 454 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 RENBPP51606 427 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 TRMT5Q32P41 509 aaKnown RBP15.27■□□□□ 0.04
LDLR-202ENST00000455727 KIAA0930Q6ICG6 404 aaPredicted RBP15.27■□□□□ 0.04
LDLR-202ENST00000455727 ESRP1Q6NXG1 681 aaKnown RBP15.27■□□□□ 0.04
LDLR-202ENST00000455727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.27■□□□□ 0.04
LDLR-202ENST00000455727 KCNV2Q8TDN2 545 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 STON2Q8WXE9 905 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 GATA5Q9BWX5 397 aaPredicted RBP15.27■□□□□ 0.04
LDLR-202ENST00000455727 TASP1Q9H6P5 420 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 PCDHB5Q9Y5E4 795 aa15.27■□□□□ 0.04
LDLR-202ENST00000455727 F7P08709 466 aaPredicted RBP15.27■□□□□ 0.03
LDLR-202ENST00000455727 COL6A1P12109 1028 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 OR1G1P47890 313 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 TBX4P57082 545 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 LIPMQ5VYY2 423 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 ZNF781Q8N8C0 355 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 STYXQ8WUJ0 223 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 LINC01599Q8WXQ3 324 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 STMN2Q93045 179 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 FAM161BQ96MY7 647 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 ZYG11BQ9C0D3 744 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 DRC3Q9H069 523 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 ILKAPQ9H0C8 392 aaPredicted RBP15.27■□□□□ 0.03
LDLR-202ENST00000455727 CXorf56Q9H5V9 222 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 COG4Q9H9E3 785 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 BATF3Q9NR55 127 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 TMEM248Q9NWD8 314 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 STX18Q9P2W9 335 aaKnown RBP15.27■□□□□ 0.03
LDLR-202ENST00000455727 ACOT9Q9Y305 439 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.27■□□□□ 0.03
LDLR-202ENST00000455727 VWA8A3KMH1 1905 aa15.27■□□□□ 0.03
LDLR-202ENST00000455727 IGLV3-10A0A075B6K4 115 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 TARM1B6A8C7 271 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 PMPCBO75439 489 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 NEBLO76041 1014 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 ELNP15502 786 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 CRABP2P29373 138 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 PRDX6P30041 224 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 RAB10P61026 200 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 TNK2Q07912 1038 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 MBTPS1Q14703 1052 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 TAF11Q15544 211 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 DDR2Q16832 855 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 VARS2Q5ST30 1063 aaKnown RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 ACBD5Q5T8D3 534 aaPredicted RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 C6orf163Q5TEZ5 329 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 KDELC1Q6UW63 502 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 KIAA0408Q6ZU52 694 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 ULK2Q8IYT8 1036 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 C2CD4AQ8NCU7 369 aaPredicted RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 CMTM5Q96DZ9 223 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 IMP4Q96G21 291 aaKnown RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 RANBP9Q96S59 729 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 FAM167BQ9BTA0 163 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.26■□□□□ 0.033e-6■□□□□ 10.6
LDLR-202ENST00000455727 ATP13A1Q9HD20 1204 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 VPS45Q9NRW7 570 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 CLIC5Q9NZA1 410 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 TADA2AO75478 443 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 CIB2O75838 187 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 SBK3P0C264 359 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 SLC34A1Q06495 639 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 THOC5Q13769 683 aaKnown RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 MRPL58Q14197 206 aaKnown RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 RCN1Q15293 331 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 FSCBQ5H9T9 825 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 CFAP157Q5JU67 520 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 MAP3K21Q5TCX8 1036 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 ATP6V0D2Q8N8Y2 350 aa15.26■□□□□ 0.03
LDLR-202ENST00000455727 NAF1Q96HR8 494 aaKnown RBP15.26■□□□□ 0.03
LDLR-202ENST00000455727 GLT1D1Q96MS3 346 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms