RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 Q6ZSR6 202 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 PTAR1Q7Z6K3 402 aaPredicted RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 PARGQ86W56 976 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 PCDH20Q8N6Y1 951 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 MSANTD4Q8NCY6 345 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 OR2A12Q8NGT7 310 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 WDR48Q8TAF3 677 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 MAPK15Q8TD08 544 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 BTN2A2Q8WVV5 523 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 KCNE4Q8WWG9 221 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 SHC3Q92529 594 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 GLMNQ92990 594 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 RAB7BQ96AH8 199 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 ARHGEF26Q96DR7 871 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 PGAP3Q96FM1 320 aaPredicted RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 HIC2Q96JB3 615 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 APOLD1Q96LR9 279 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 C1orf74Q96LT6 269 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 SIK2Q9H0K1 926 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 RETREG1Q9H6L5 497 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 DNAJC28Q9NX36 388 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 ARHGEF38Q9NXL2 777 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 APEX2Q9UBZ4 518 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 IPO11Q9UI26 975 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 VPS51Q9UID3 782 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 LOC400499M0QZD8 3231 aa8.2□□□□□ -1.1
NIF3L1-209ENST00000454952 ILVBLA1L0T0 632 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 K7ESM1 405 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 FPGTO14772 594 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 TPP1O14773 563 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 TSPAN6O43657 245 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 AP1G1O43747 822 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 USP12O75317 370 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 CSO75390 466 aaKnown RBP8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 TCEA3O75764 348 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 GRAP2O75791 330 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 C1QL1O75973 258 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 PRB1P04280 392 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 CTSLP07711 333 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 NME1P15531 152 aaKnown RBP8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 RBMS1P29558 406 aaKnown RBP8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 OR1E1P30953 314 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 CXCR3P49682 368 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 BECN1Q14457 450 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 ARHGAP44Q17R89 818 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 EXOC3L4Q17RC7 722 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 TMEM259Q4ZIN3 620 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 ISM2Q6H9L7 571 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 C22orf39Q6P5X5 142 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 FAM183BPQ6ZVS7 135 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 TMC6Q7Z403 805 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 ZNF843Q8N446 348 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 DENND6BQ8NEG7 585 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 OR13H1Q8NG92 308 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 GRIN3AQ8TCU5 1115 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 ASB12Q8WXK4 309 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 NAT6Q93015 286 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 TBATAQ96M53 351 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 HAPLN3Q96S86 360 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 MYOCQ99972 504 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 C1QTNF7Q9BXJ2 289 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC17A9Q9BYT1 436 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 TKTL2Q9H0I9 626 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 PDCL3Q9H2J4 239 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 UCKL1Q9NWZ5 548 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 SALL4Q9UJQ4 1053 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 CA5BQ9Y2D0 317 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 BPTFQ12830 3046 aa8.19□□□□□ -1.1
NIF3L1-209ENST00000454952 FLNBO75369 2602 aaKnown RBP8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 IGLV3-10A0A075B6K4 115 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 SPTY2D1-AS1A0A0U1RR47 76 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 DRGXA6NNA5 263 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 BECN2A8MW95 431 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 NEMP1O14524 444 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 TOR1BO14657 336 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 KLK10O43240 276 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 SNAP91O60641 907 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 LEFTY1O75610 366 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ADCY5O95622 1261 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 MT-CO1P00395 513 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 CSF2P04141 144 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ERBB2P04626 1255 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 MPOP05164 745 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ADRB3P13945 408 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 RRM1P23921 792 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 L1CAMP32004 1257 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 NUMBP49757 651 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 SULT1E1P49888 294 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 SERPINH1P50454 418 aaKnown RBP8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 STX17P56962 302 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 DEUP1Q05D60 604 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 VAC14Q08AM6 782 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 PTK2BQ14289 1009 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 NR0B2Q15466 257 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 ISXQ2M1V0 245 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC25A52Q3SY17 297 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 GCNT7Q6ZNI0 430 aa8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 RBM44Q6ZP01 1051 aaKnown RBP8.18□□□□□ -1.1
NIF3L1-209ENST00000454952 DPY19L3Q6ZPD9 716 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms