RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 RAD9AQ99638 391 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 OSMRQ99650 979 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 GPR22Q99680 433 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ECSITQ9BQ95 431 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 FAM167BQ9BTA0 163 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 MCMBPQ9BTE3 642 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 LRFN3Q9BTN0 628 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 C20orf27Q9GZN8 174 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ILKAPQ9H0C8 392 aaPredicted RBP10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 MRPL40Q9NQ50 206 aaKnown RBP10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 TMEM216Q9P0N5 145 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 CDH9Q9ULB4 789 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 PIN4Q9Y237 131 aaKnown RBP10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 RAP2CQ9Y3L5 183 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ASB3Q9Y575 518 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 MICAL3Q7RTP6 2002 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 PTPRDP23468 1912 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 SHROOM3Q8TF72 1996 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 A0A096LPK6 155 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ZCWPW2A0A1B0GU75 182 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 FAM86C2PA6NEL3 165 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 C2orf71A6NGG8 1288 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ZNF195O14628 629 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 CASQ2O14958 399 aaPredicted RBP10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ANXA9O76027 345 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 LTFP02788 710 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 PAX7P23759 505 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 LMO2P25791 158 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 TKTP29401 623 aaKnown RBP10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 TKTL1P51854 596 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ATXN1P54253 815 aaKnown RBP10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ERVK-21P61565 698 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 PRKAA1Q13131 559 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 IKBKEQ14164 716 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 TMEM31Q5JXX7 168 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 UBXN11Q5T124 520 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 LIPMQ5VYY2 423 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ZFP1Q6P2D0 407 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 DCLRE1AQ6PJP8 1040 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ZCCHC23Q6ZST2 131 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ACAD11Q709F0 780 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 STRA8Q7Z7C7 330 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 DHDDSQ86SQ9 333 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 KCNMB4Q86W47 210 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 CNTN4Q8IWV2 1026 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 UNC5BQ8IZJ1 945 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 DNAAF3Q8N9W5 541 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 URGCPQ8TCY9 931 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 ZFAND2BQ8WV99 257 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 TEKT5Q96M29 485 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 BTBD9Q96Q07 612 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 EBF4Q9BQW3 602 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 MED10Q9BTT4 135 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 KIFC1Q9BW19 673 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 DRC3Q9H069 523 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 OSBPL2Q9H1P3 480 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 RHOJQ9H4E5 214 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 WDR6Q9NNW5 1121 aaKnown RBP10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 KRT82Q9NSB4 513 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 MARCOQ9UEW3 520 aaPredicted RBP10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 HCN4Q9Y3Q4 1203 aa10.75□□□□□ -0.69
GTF3C2-206ENST00000454704 MUC6Q6W4X9 2439 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 DPPA5A6NC42 116 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 ARHGAP42A6NI28 874 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 SPTLC1O15269 473 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 HDAC3O15379 428 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 FGF10O15520 208 aaPredicted RBP10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 ITM2AO43736 263 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 CREB3O43889 395 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 EFCAB14O75071 495 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 PRKCGP05129 697 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 PAMP19021 973 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 KCNA4P22459 653 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 CCNCP24863 283 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 PCSK1P29120 753 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 RPL9P32969 192 aaKnown RBP10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 THPOP40225 353 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 CPA2P48052 419 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 CXCR3P49682 368 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 MTTPP55157 894 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 SATB1Q01826 763 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 ITGA9Q13797 1035 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 GLRA4Q5JXX5 417 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 BRMS1LQ5PSV4 323 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 PM20D1Q6GTS8 502 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 FSTL4Q6MZW2 842 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 TAF2Q6P1X5 1199 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 C16orf46Q6P387 395 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 ZYG11AQ6WRX3 759 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 FAM35AQ86V20 835 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 OSTM1Q86WC4 334 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 PYROXD2Q8N2H3 581 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 TMEM130Q8N3G9 435 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 AFAP1L2Q8N4X5 818 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 CPSF7Q8N684 471 aaKnown RBP10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 OR52K1Q8NGK4 314 aa10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 RP9Q8TA86 221 aaKnown RBP10.74□□□□□ -0.69
GTF3C2-206ENST00000454704 DLG3Q92796 817 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms