RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 BUB1BO60566 1050 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-205ENST00000454542 RNASEH2AO75792 299 aaKnown RBP14.41□□□□□ -0.1
HDAC4-205ENST00000454542 PEX11BO96011 259 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 GJC1P36383 396 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 GSDMDP57764 484 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 IL10RBQ08334 325 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 MMRN1Q13201 1228 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 PAFAH1B3Q15102 231 aaKnown RBP14.41□□□□□ -0.1
HDAC4-205ENST00000454542 DCAF12L1Q5VU92 463 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 ARHGAP36Q6ZRI8 547 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 FAM124AQ86V42 546 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 HDDC3Q8N4P3 179 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 PCDH19Q8TAB3 1148 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 C1orf216Q8TAB5 229 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 ARRDC3Q96B67 414 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 LRIG1Q96JA1 1093 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 CALR3Q96L12 384 aaKnown RBP14.41□□□□□ -0.1
HDAC4-205ENST00000454542 HEPHQ9BQS7 1158 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 TM6SF2Q9BZW4 377 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 NEUROG2Q9H2A3 272 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 KDM4CQ9H3R0 1056 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 KLHL11Q9NVR0 708 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 UBA2Q9UBT2 640 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-205ENST00000454542 NCKAP1Q9Y2A7 1128 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-205ENST00000454542 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-205ENST00000454542 SDK1Q7Z5N4 2213 aa14.41□□□□□ -0.1
HDAC4-205ENST00000454542 PSTPIP1O43586 416 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 LEFTY1O75610 366 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 IPO7O95373 1038 aaKnown RBP14.4□□□□□ -0.1
HDAC4-205ENST00000454542 IGHV4-34P06331 123 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 COMTP21964 271 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 KDELR1P24390 212 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 ITGB7P26010 798 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 SSR1P43307 286 aaKnown RBP14.4□□□□□ -0.1
HDAC4-205ENST00000454542 RECQLP46063 649 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-205ENST00000454542 SNRPD1P62314 119 aaKnown RBP14.4□□□□□ -0.1
HDAC4-205ENST00000454542 LMNB2Q03252 620 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 CNTN1Q12860 1018 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 RFTN1Q14699 578 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-205ENST00000454542 SF3A2Q15428 464 aaKnown RBP14.4□□□□□ -0.1
HDAC4-205ENST00000454542 CYTH1Q15438 398 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 CCDC6Q16204 474 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 TAZQ16635 292 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 ANKRD20A8PQ5CZ79 823 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 WDR45BQ5MNZ6 344 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 TCEAL6Q6IPX3 200 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 SLC23A3Q6PIS1 610 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 LEKR1Q6ZMV7 388 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 RABEPKQ7Z6M1 372 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 KIAA2013Q8IYS2 634 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 PQLC3Q8N755 202 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 NETO2Q8NC67 525 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 OR2T34Q8NGX1 318 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 TPCN2Q8NHX9 752 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 GRIN3AQ8TCU5 1115 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 RAPGEF5Q92565 580 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 PIGKQ92643 395 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 TCEAL3Q969E4 200 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 GDAP1L1Q96MZ0 367 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 ZNF599Q96NL3 588 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 OMDQ99983 421 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 HDAC8Q9BY41 377 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 LACRTQ9GZZ8 138 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 SMOC1Q9H4F8 434 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 CAPN10Q9HC96 672 aa14.4□□□□□ -0.1
HDAC4-205ENST00000454542 IPO11Q9UI26 975 aaKnown RBP14.4□□□□□ -0.1
HDAC4-205ENST00000454542 TPX2Q9ULW0 747 aaKnown RBP14.4□□□□□ -0.1
HDAC4-205ENST00000454542 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.4□□□□□ -0.1
HDAC4-205ENST00000454542 CACNA1EQ15878 2313 aa14.4□□□□□ -0.11
HDAC4-205ENST00000454542 DNAH14Q0VDD8 3507 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 LAMA1P25391 3075 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 LNP1A1A4G5 178 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 MEI4A8MW99 385 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 GOLGA6L6A8MZA4 724 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 PATE3B3GLJ2 98 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 DFFAO00273 331 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 LATO43561 262 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 BNIP3LO60238 219 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 MAFKO60675 156 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 IGSF6O95976 241 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 CCR5P51681 352 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 LIMK1P53667 647 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 TAS2R38P59533 333 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 GALNT2Q10471 571 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 ARSIQ5FYB1 569 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 SYCP2LQ5T4T6 812 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 ATXN7L2Q5T6C5 722 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-205ENST00000454542 TMCO4Q5TGY1 634 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 KIAA0895LQ68EN5 471 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 SLC9A4Q6AI14 798 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 NCEH1Q6PIU2 408 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 ZNF354CQ86Y25 554 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 MAP7D3Q8IWC1 876 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 RHOT1Q8IXI2 618 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 DEFB119Q8N690 84 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 KCTD6Q8NC69 237 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 BIRC7Q96CA5 298 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 PPP1R16AQ96I34 528 aa14.39□□□□□ -0.11
HDAC4-205ENST00000454542 CALN1Q9BXU9 219 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms