RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 PABPN1LA6NDY0 278 aaKnown RBP5.34□□□□□ -1.55
CUL3-208ENST00000454323 LIPT2A6NK58 231 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 SYN3O14994 580 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 SEC14L2O76054 403 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 BEST1O76090 585 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 TJP3O95049 919 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 RHOP08100 348 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 MATN1P21941 496 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 PRPH2P23942 346 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 NFKBIAP25963 317 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 CLCN2P51788 898 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 ARHGAP8P85298 464 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 GOLGA8FQ08AF8 430 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 CDC16Q13042 620 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 STK4Q13043 487 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 KLF9Q13886 244 aaPredicted RBP5.34□□□□□ -1.55
CUL3-208ENST00000454323 ZNF618Q5T7W0 954 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 TEDDM1Q5T9Z0 273 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 CYP20A1Q6UW02 462 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 PTCHD4Q6ZW05 846 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 SCN4BQ8IWT1 228 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 WDTC1Q8N5D0 677 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 MYCBPAPQ8TBZ2 947 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 XAGE5Q8WWM1 108 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 FKBP10Q96AY3 582 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 HMCESQ96FZ2 354 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 PIP5K1AQ99755 562 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 MGAT4CQ9UBM8 478 aa5.34□□□□□ -1.55
CUL3-208ENST00000454323 CORO1CQ9ULV4 474 aaPredicted RBP5.34□□□□□ -1.55
CUL3-208ENST00000454323 FHOD3Q2V2M9 1422 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 WDR27A2RRH5 827 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 PER2O15055 1255 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 TMPRSS11DO60235 418 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 PRAMEF2O60811 474 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 NTN1O95631 604 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 DUSP1P28562 367 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 EPHB2P29323 1055 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 GARSP41250 739 aaKnown RBP5.33□□□□□ -1.56
CUL3-208ENST00000454323 MTNR1AP48039 350 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 RPS6KA3P51812 740 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
CUL3-208ENST00000454323 CCDC15Q0P6D6 951 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 ALKBH1Q13686 389 aaKnown RBP5.33□□□□□ -1.56
CUL3-208ENST00000454323 PSMD6Q15008 389 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 NAPEPLDQ6IQ20 393 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 MTFR2Q6P444 385 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 GJB7Q6PEY0 223 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 TMEM88Q6PEY1 159 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 SLC39A5Q6ZMH5 540 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 SIRT6Q8N6T7 355 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 PLD5Q8N7P1 536 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 ENDOVQ8N8Q3 282 aaKnown RBP5.33□□□□□ -1.56
CUL3-208ENST00000454323 SCFD2Q8WU76 684 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 RAB40AQ8WXH6 277 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 TFAP2BQ92481 460 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 KCNJ9Q92806 393 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 HTATIP2Q9BUP3 242 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 CINPQ9BW66 212 aaPredicted RBP5.33□□□□□ -1.56
CUL3-208ENST00000454323 ABHD10Q9NUJ1 306 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 HDAC6Q9UBN7 1215 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 DKK3Q9UBP4 350 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 LIMA1Q9UHB6 759 aaKnown RBP5.33□□□□□ -1.56
CUL3-208ENST00000454323 KCNE2Q9Y6J6 123 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 ARHGEF12Q9NZN5 1544 aa5.33□□□□□ -1.56
CUL3-208ENST00000454323 C17orf100A8MU93 164 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 VWC2LB2RUY7 222 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 AP4M1O00189 453 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 LDLRAD4O15165 306 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 EIF2S1P05198 315 aaKnown RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 CLTBP09497 229 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 CDH2P19022 906 aaPredicted RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 NNMTP40261 264 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 DIO1P49895 249 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 JAK3P52333 1124 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 EIF3BP55884 814 aaKnown RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 SNX16P57768 344 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 GPC5P78333 572 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 RAE1P78406 368 aaKnown RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 TXNL4AP83876 142 aaKnown RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 EFNB1P98172 346 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 E2F1Q01094 437 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 CALD1Q05682 793 aaKnown RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 TMEM115Q12893 351 aaPredicted RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 BYSLQ13895 437 aaKnown RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 MED22Q15528 200 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 PLEKHS1Q5SXH7 462 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 NAA16Q6N069 864 aaPredicted RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 NCEH1Q6PIU2 408 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 KYAT3Q6YP21 454 aaKnown RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 TECPR1Q7Z6L1 1165 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 LAS2Q8IYD9 372 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 SRFBP1Q8NEF9 429 aaKnown RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 NCSTNQ92542 709 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 ARHGEF2Q92974 986 aaKnown RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 SNX18Q96RF0 628 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 ALG8Q9BVK2 526 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 NPLQ9BXD5 320 aaPredicted RBP5.32□□□□□ -1.56
CUL3-208ENST00000454323 HDHD5Q9BXW7 423 aa5.32□□□□□ -1.56
CUL3-208ENST00000454323 FTOQ9C0B1 505 aaKnown RBP eCLIP5.32□□□□□ -1.56
CUL3-208ENST00000454323 EPHX3Q9H6B9 360 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms